Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
COMMD1Q8N668 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.16■□□□□ 0.02
COMMD1Q8N668 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD1Q8N668 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.16■□□□□ 0.02
COMMD1Q8N668 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD1Q8N668 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COMMD1Q8N668 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
COMMD1Q8N668 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.15■□□□□ 0.02
COMMD1Q8N668 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 AL645608.8-201ENST00000606034 2086 ntBASIC15.15■□□□□ 0.02
COMMD1Q8N668 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.15■□□□□ 0.02
COMMD1Q8N668 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
COMMD1Q8N668 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
COMMD1Q8N668 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.15■□□□□ 0.02
COMMD1Q8N668 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
COMMD1Q8N668 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.15■□□□□ 0.02
COMMD1Q8N668 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.15■□□□□ 0.02
COMMD1Q8N668 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.15■□□□□ 0.02
COMMD1Q8N668 AL160286.2-201ENST00000567150 934 ntBASIC15.15■□□□□ 0.02
COMMD1Q8N668 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.15■□□□□ 0.02
COMMD1Q8N668 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.15■□□□□ 0.02
COMMD1Q8N668 AC083906.6-201ENST00000641366 219 ntBASIC15.15■□□□□ 0.02
COMMD1Q8N668 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
COMMD1Q8N668 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.15■□□□□ 0.02
COMMD1Q8N668 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.15■□□□□ 0.02
COMMD1Q8N668 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
COMMD1Q8N668 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD1Q8N668 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.14■□□□□ 0.01
COMMD1Q8N668 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
COMMD1Q8N668 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD1Q8N668 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.14■□□□□ 0.01
COMMD1Q8N668 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
COMMD1Q8N668 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.14■□□□□ 0.01
COMMD1Q8N668 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD1Q8N668 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
COMMD1Q8N668 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
COMMD1Q8N668 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD1Q8N668 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD1Q8N668 AC004951.3-201ENST00000418645 1148 ntBASIC15.14■□□□□ 0.01
COMMD1Q8N668 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD1Q8N668 B3GAT3P1-201ENST00000471720 806 ntBASIC15.14■□□□□ 0.01
COMMD1Q8N668 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD1Q8N668 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.14■□□□□ 0.01
COMMD1Q8N668 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.14■□□□□ 0.01
COMMD1Q8N668 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD1Q8N668 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD1Q8N668 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD1Q8N668 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.14■□□□□ 0.01
COMMD1Q8N668 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD1Q8N668 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.14■□□□□ 0.01
COMMD1Q8N668 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD1Q8N668 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD1Q8N668 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD1Q8N668 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
COMMD1Q8N668 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD1Q8N668 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
COMMD1Q8N668 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD1Q8N668 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COMMD1Q8N668 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
COMMD1Q8N668 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
COMMD1Q8N668 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
COMMD1Q8N668 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.13■□□□□ 0.01
COMMD1Q8N668 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD1Q8N668 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
COMMD1Q8N668 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD1Q8N668 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD1Q8N668 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.13■□□□□ 0.01
COMMD1Q8N668 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD1Q8N668 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD1Q8N668 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.13■□□□□ 0.01
COMMD1Q8N668 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD1Q8N668 AC087499.1-201ENST00000418141 1075 ntBASIC15.13■□□□□ 0.01
COMMD1Q8N668 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD1Q8N668 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.13■□□□□ 0.01
COMMD1Q8N668 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD1Q8N668 FITM1-202ENST00000559294 800 ntBASIC15.13■□□□□ 0.01
COMMD1Q8N668 AP005242.2-201ENST00000580065 1175 ntBASIC15.13■□□□□ 0.01
COMMD1Q8N668 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.13■□□□□ 0.01
COMMD1Q8N668 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.13■□□□□ 0.01
COMMD1Q8N668 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.13■□□□□ 0.01
COMMD1Q8N668 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.13■□□□□ 0.01
COMMD1Q8N668 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COMMD1Q8N668 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms