Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SMC5Q8IY18 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
SMC5Q8IY18 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMC5Q8IY18 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMC5Q8IY18 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC22.54■■□□□ 1.2
SMC5Q8IY18 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.54■■□□□ 1.2
SMC5Q8IY18 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SMC5Q8IY18 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC22.54■■□□□ 1.2
SMC5Q8IY18 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMC5Q8IY18 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SMC5Q8IY18 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
SMC5Q8IY18 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMC5Q8IY18 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMC5Q8IY18 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.54■■□□□ 1.2
SMC5Q8IY18 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC22.54■■□□□ 1.2
SMC5Q8IY18 CD81-212ENST00000526072 1172 ntTSL 5 BASIC22.54■■□□□ 1.2
SMC5Q8IY18 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.54■■□□□ 1.2
SMC5Q8IY18 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC22.54■■□□□ 1.2
SMC5Q8IY18 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMC5Q8IY18 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.54■■□□□ 1.2
SMC5Q8IY18 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
SMC5Q8IY18 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMC5Q8IY18 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SMC5Q8IY18 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SMC5Q8IY18 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMC5Q8IY18 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMC5Q8IY18 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SMC5Q8IY18 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SMC5Q8IY18 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMC5Q8IY18 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC22.53■■□□□ 1.2
SMC5Q8IY18 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMC5Q8IY18 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMC5Q8IY18 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMC5Q8IY18 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC22.53■■□□□ 1.2
SMC5Q8IY18 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.53■■□□□ 1.2
SMC5Q8IY18 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
SMC5Q8IY18 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC22.53■■□□□ 1.2
SMC5Q8IY18 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SMC5Q8IY18 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMC5Q8IY18 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SMC5Q8IY18 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMC5Q8IY18 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
SMC5Q8IY18 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMC5Q8IY18 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC22.52■■□□□ 1.2
SMC5Q8IY18 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC22.52■■□□□ 1.2
SMC5Q8IY18 AC100803.2-201ENST00000562459 1963 ntBASIC22.52■■□□□ 1.2
SMC5Q8IY18 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC22.52■■□□□ 1.2
SMC5Q8IY18 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
SMC5Q8IY18 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SMC5Q8IY18 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC22.52■■□□□ 1.2
SMC5Q8IY18 WAC-202ENST00000347934 2839 ntTSL 5 BASIC22.52■■□□□ 1.2
SMC5Q8IY18 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
SMC5Q8IY18 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
SMC5Q8IY18 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
SMC5Q8IY18 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC22.52■■□□□ 1.2
SMC5Q8IY18 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SMC5Q8IY18 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC22.52■■□□□ 1.2
SMC5Q8IY18 GCSHP2-201ENST00000560971 527 ntBASIC22.52■■□□□ 1.2
SMC5Q8IY18 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC22.52■■□□□ 1.2
SMC5Q8IY18 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC22.52■■□□□ 1.2
SMC5Q8IY18 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SMC5Q8IY18 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
SMC5Q8IY18 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC5Q8IY18 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SMC5Q8IY18 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
SMC5Q8IY18 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
SMC5Q8IY18 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.51■■□□□ 1.19
SMC5Q8IY18 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SMC5Q8IY18 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC5Q8IY18 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms