Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC007613.1-201ENST00000572811 2597 ntBASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCUBE3Q8IX30 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
SCUBE3Q8IX30 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
SCUBE3Q8IX30 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 FAM86EP-206ENST00000510506 987 ntBASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 REXO1L9P-201ENST00000604264 2108 ntBASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.14■□□□□ 0.65
SCUBE3Q8IX30 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 ABALON-201ENST00000629058 1903 ntBASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 KRT18P48-201ENST00000434763 852 ntBASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 TPM4P1-201ENST00000436100 807 ntBASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 AL136038.3-201ENST00000561909 1096 ntBASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 AL121956.5-201ENST00000625261 221 ntBASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 AL354751.1-201ENST00000412768 1863 ntBASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCUBE3Q8IX30 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 AP003733.1-201ENST00000491725 852 ntBASIC19.12■□□□□ 0.65
SCUBE3Q8IX30 RNF126P1-202ENST00000569893 925 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms