Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM42Q8IWZ5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 AC128676.1-201ENST00000454392 318 ntBASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 AC006116.8-202ENST00000587620 1550 ntBASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 AL391005.1-201ENST00000623953 2435 ntBASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM42Q8IWZ5 AL109659.2-201ENST00000606809 1674 ntBASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 AL513477.1-201ENST00000602865 2407 ntBASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 AL445675.2-201ENST00000620291 557 ntBASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM42Q8IWZ5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 PHGDH-209ENST00000641074 1780 ntBASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 KRT17P3-201ENST00000420566 1262 ntBASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms