Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 LINC00167-201ENST00000530583 1419 ntBASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 TSPY12P-201ENST00000421279 868 ntBASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 RN7SL606P-201ENST00000472779 293 ntBASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 AC104819.1-201ENST00000504587 486 ntBASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 AC113404.2-201ENST00000507884 177 ntBASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 AC074051.2-201ENST00000565115 352 ntBASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 AC233702.3-201ENST00000578656 1387 ntBASIC19.18■□□□□ 0.66
SCN4BQ8IWT1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 LINC00602-201ENST00000629776 2065 ntBASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 AC012615.1-201ENST00000565797 1299 ntBASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 GMCL1P1-201ENST00000463439 1581 ntBASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN4BQ8IWT1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 VENTXP7-201ENST00000475503 772 ntBASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 AC011840.4-201ENST00000578471 627 ntBASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 Z69720.1-201ENST00000601483 472 ntBASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms