Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
NUDCD3Q8IVD9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
NUDCD3Q8IVD9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUDCD3Q8IVD9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUDCD3Q8IVD9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NUDCD3Q8IVD9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.14■□□□□ 0.49
NUDCD3Q8IVD9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUDCD3Q8IVD9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NUDCD3Q8IVD9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 KSR1P1-201ENST00000446298 240 ntBASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 AC026366.1-201ENST00000488803 879 ntBASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 PP12613-201ENST00000424958 2230 ntBASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.12■□□□□ 0.49
NUDCD3Q8IVD9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 AC099343.3-201ENST00000605834 2503 ntBASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 AC106820.2-201ENST00000563775 3264 ntBASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 AC008040.2-201ENST00000461049 708 ntBASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 AC124016.1-201ENST00000609552 612 ntBASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 AC110285.5-201ENST00000611501 352 ntBASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 AC008622.2-201ENST00000617006 1229 ntBASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 KRT8P50-201ENST00000562022 1438 ntBASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 AC141586.5-201ENST00000624546 2050 ntBASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
NUDCD3Q8IVD9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms