Protein–RNA interactions for Protein: Q8IV35

WDR49, WD repeat-containing protein 49, humanhuman

Predictions only

Length 697 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR49Q8IV35 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.58■□□□□ 0.72
WDR49Q8IV35 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.58■□□□□ 0.72
WDR49Q8IV35 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
WDR49Q8IV35 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.58■□□□□ 0.72
WDR49Q8IV35 AL354751.1-201ENST00000412768 1863 ntBASIC19.58■□□□□ 0.72
WDR49Q8IV35 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
WDR49Q8IV35 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
WDR49Q8IV35 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
WDR49Q8IV35 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
WDR49Q8IV35 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.58■□□□□ 0.72
WDR49Q8IV35 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
WDR49Q8IV35 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
WDR49Q8IV35 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
WDR49Q8IV35 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
WDR49Q8IV35 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
WDR49Q8IV35 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.57■□□□□ 0.72
WDR49Q8IV35 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.57■□□□□ 0.72
WDR49Q8IV35 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.57■□□□□ 0.72
WDR49Q8IV35 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
WDR49Q8IV35 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
WDR49Q8IV35 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.57■□□□□ 0.72
WDR49Q8IV35 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
WDR49Q8IV35 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
WDR49Q8IV35 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.57■□□□□ 0.72
WDR49Q8IV35 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
WDR49Q8IV35 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
WDR49Q8IV35 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
WDR49Q8IV35 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
WDR49Q8IV35 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
WDR49Q8IV35 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
WDR49Q8IV35 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.57■□□□□ 0.72
WDR49Q8IV35 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.57■□□□□ 0.72
WDR49Q8IV35 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
WDR49Q8IV35 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.57■□□□□ 0.72
WDR49Q8IV35 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
WDR49Q8IV35 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
WDR49Q8IV35 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
WDR49Q8IV35 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
WDR49Q8IV35 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
WDR49Q8IV35 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
WDR49Q8IV35 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
WDR49Q8IV35 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.57■□□□□ 0.72
WDR49Q8IV35 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
WDR49Q8IV35 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
WDR49Q8IV35 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
WDR49Q8IV35 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
WDR49Q8IV35 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.56■□□□□ 0.72
WDR49Q8IV35 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.56■□□□□ 0.72
WDR49Q8IV35 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
WDR49Q8IV35 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
WDR49Q8IV35 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
WDR49Q8IV35 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
WDR49Q8IV35 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
WDR49Q8IV35 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.56■□□□□ 0.72
WDR49Q8IV35 BX276092.5-203ENST00000456199 560 ntBASIC19.56■□□□□ 0.72
WDR49Q8IV35 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.56■□□□□ 0.72
WDR49Q8IV35 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.56■□□□□ 0.72
WDR49Q8IV35 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
WDR49Q8IV35 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
WDR49Q8IV35 REXO1L9P-201ENST00000604264 2108 ntBASIC19.56■□□□□ 0.72
WDR49Q8IV35 AL121672.3-201ENST00000608644 468 ntBASIC19.56■□□□□ 0.72
WDR49Q8IV35 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.56■□□□□ 0.72
WDR49Q8IV35 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.56■□□□□ 0.72
WDR49Q8IV35 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
WDR49Q8IV35 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
WDR49Q8IV35 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
WDR49Q8IV35 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
WDR49Q8IV35 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.56■□□□□ 0.72
WDR49Q8IV35 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
WDR49Q8IV35 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
WDR49Q8IV35 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
WDR49Q8IV35 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
WDR49Q8IV35 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
WDR49Q8IV35 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.55■□□□□ 0.72
WDR49Q8IV35 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
WDR49Q8IV35 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
WDR49Q8IV35 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
WDR49Q8IV35 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
WDR49Q8IV35 TSPY12P-201ENST00000421279 868 ntBASIC19.55■□□□□ 0.72
WDR49Q8IV35 KRT18P65-201ENST00000439811 1286 ntBASIC19.55■□□□□ 0.72
WDR49Q8IV35 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
WDR49Q8IV35 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.55■□□□□ 0.72
WDR49Q8IV35 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.55■□□□□ 0.72
WDR49Q8IV35 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.55■□□□□ 0.72
WDR49Q8IV35 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
WDR49Q8IV35 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.55■□□□□ 0.72
WDR49Q8IV35 AC009154.2-201ENST00000621177 724 ntBASIC19.55■□□□□ 0.72
WDR49Q8IV35 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
WDR49Q8IV35 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.55■□□□□ 0.72
WDR49Q8IV35 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.55■□□□□ 0.72
WDR49Q8IV35 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
WDR49Q8IV35 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
WDR49Q8IV35 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
WDR49Q8IV35 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
WDR49Q8IV35 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
WDR49Q8IV35 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
WDR49Q8IV35 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
WDR49Q8IV35 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
WDR49Q8IV35 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
WDR49Q8IV35 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms