Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 MESTP1-201ENST00000404287 994 ntBASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 AL158047.1-201ENST00000445918 881 ntBASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 GRAMD4P8-201ENST00000605465 1115 ntBASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 PRORSD1P-201ENST00000295112 541 ntBASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 RPS2P55-201ENST00000397318 883 ntBASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 AC012618.2-201ENST00000428058 849 ntBASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 AL355355.2-201ENST00000442321 338 ntBASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 CA15P1-201ENST00000481698 905 ntBASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 AC107956.1-201ENST00000494359 873 ntBASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 AC116562.2-201ENST00000507042 360 ntBASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 AC097488.1-201ENST00000507834 756 ntBASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 KRT18P41-201ENST00000518924 1277 ntBASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 AC034236.2-201ENST00000606662 1610 ntBASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
MRPL55Q7Z7F7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 AC020916.1-201ENST00000587762 1774 ntBASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL55Q7Z7F7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms