Protein–RNA interactions for Protein: Q7Z5N4

SDK1, Protein sidekick-1, humanhuman

Predictions only

Length 2,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1Q7Z5N4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDK1Q7Z5N4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.04■□□□□ 0.48
SDK1Q7Z5N4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.04■□□□□ 0.48
SDK1Q7Z5N4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.04■□□□□ 0.48
SDK1Q7Z5N4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SDK1Q7Z5N4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.04■□□□□ 0.48
SDK1Q7Z5N4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SDK1Q7Z5N4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SDK1Q7Z5N4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SDK1Q7Z5N4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.04■□□□□ 0.48
SDK1Q7Z5N4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SDK1Q7Z5N4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SDK1Q7Z5N4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SDK1Q7Z5N4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SDK1Q7Z5N4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SDK1Q7Z5N4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SDK1Q7Z5N4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 AL591424.1-201ENST00000442569 1213 ntBASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 FAM197Y3-203ENST00000618346 717 ntBASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 AC004817.3-201ENST00000602957 2129 ntBASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 INTS4P1-201ENST00000438455 1935 ntBASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 OR7E14P-202ENST00000530490 1290 ntBASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SDK1Q7Z5N4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 AL049812.1-201ENST00000432563 2267 ntBASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 AC113404.2-201ENST00000507884 177 ntBASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SDK1Q7Z5N4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SDK1Q7Z5N4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
SDK1Q7Z5N4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
SDK1Q7Z5N4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.02■□□□□ 0.47
SDK1Q7Z5N4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.02■□□□□ 0.47
SDK1Q7Z5N4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SDK1Q7Z5N4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.02■□□□□ 0.47
SDK1Q7Z5N4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.02■□□□□ 0.47
SDK1Q7Z5N4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SDK1Q7Z5N4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
SDK1Q7Z5N4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.02■□□□□ 0.47
SDK1Q7Z5N4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.02■□□□□ 0.47
SDK1Q7Z5N4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 AL596442.2-201ENST00000610240 980 ntBASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SDK1Q7Z5N4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms