Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 FAAHP1-202ENST00000446499 1238 ntBASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 BX323043.1-201ENST00000641006 1765 ntBASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC22.65■■□□□ 1.22
UBE3BQ7Z3V4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC22.64■■□□□ 1.22
UBE3BQ7Z3V4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
UBE3BQ7Z3V4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC22.64■■□□□ 1.22
UBE3BQ7Z3V4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
UBE3BQ7Z3V4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 KRT18P65-201ENST00000439811 1286 ntBASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 AC079781.3-201ENST00000449110 356 ntBASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 AC096582.2-201ENST00000510860 516 ntBASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 LINC01711-201ENST00000598340 967 ntBASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 AL031008.1-201ENST00000619963 541 ntBASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
UBE3BQ7Z3V4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 KRT16P4-201ENST00000453883 522 ntBASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 PHGDH-209ENST00000641074 1780 ntBASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
UBE3BQ7Z3V4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 AKR1C7P-201ENST00000305623 895 ntBASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
UBE3BQ7Z3V4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22.61■■□□□ 1.21
UBE3BQ7Z3V4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22.61■■□□□ 1.21
UBE3BQ7Z3V4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
UBE3BQ7Z3V4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
UBE3BQ7Z3V4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms