Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 SART3-203ENST00000546611 1184 ntBASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 AP001269.4-201ENST00000609611 512 ntBASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
OTOP1Q7RTM1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 AC092910.1-201ENST00000482027 1129 ntBASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 AC021087.4-201ENST00000563761 564 ntBASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 AL357033.4-201ENST00000617703 1807 ntBASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 KRT18P28-201ENST00000453838 1332 ntBASIC21.04■□□□□ 0.96
OTOP1Q7RTM1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 HTR5BP-201ENST00000430851 1154 ntBASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 RPS2P1-201ENST00000434010 821 ntBASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 RNA5SP415-201ENST00000517246 115 ntBASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 HLA-J-201ENST00000462773 1622 ntBASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
OTOP1Q7RTM1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 AC004832.2-201ENST00000426397 482 ntBASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.02■□□□□ 0.96
OTOP1Q7RTM1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
OTOP1Q7RTM1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.02■□□□□ 0.95
OTOP1Q7RTM1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
OTOP1Q7RTM1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.01■□□□□ 0.95
OTOP1Q7RTM1 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC21.01■□□□□ 0.95
OTOP1Q7RTM1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
OTOP1Q7RTM1 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
OTOP1Q7RTM1 CYMP-203ENST00000474680 1263 ntBASIC21.01■□□□□ 0.95
OTOP1Q7RTM1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.01■□□□□ 0.95
OTOP1Q7RTM1 AC012640.2-201ENST00000561606 901 ntBASIC21.01■□□□□ 0.95
OTOP1Q7RTM1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.01■□□□□ 0.95
OTOP1Q7RTM1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.01■□□□□ 0.95
OTOP1Q7RTM1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.01■□□□□ 0.95
OTOP1Q7RTM1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
OTOP1Q7RTM1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.01■□□□□ 0.95
OTOP1Q7RTM1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
OTOP1Q7RTM1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms