Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 CNN2P6-201ENST00000439038 900 ntBASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 AL589743.5-201ENST00000616611 1050 ntBASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LINC00173Q6ZV60 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 PCDHB17P-201ENST00000539533 2393 ntBASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC00173Q6ZV60 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00173Q6ZV60 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.21□□□□□ -0.3
LINC00173Q6ZV60 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00173Q6ZV60 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00173Q6ZV60 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.3
LINC00173Q6ZV60 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
LINC00173Q6ZV60 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
LINC00173Q6ZV60 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00173Q6ZV60 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00173Q6ZV60 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00173Q6ZV60 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00173Q6ZV60 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 AC124283.5-201ENST00000624661 1809 ntBASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 AC005837.3-201ENST00000612163 286 ntBASIC13.2□□□□□ -0.3
LINC00173Q6ZV60 RALB-208ENST00000631312 311 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms