Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 AL162741.1-201ENST00000565563 1558 ntBASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 LINC01311-201ENST00000565162 1445 ntBASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 AL391807.1-203ENST00000604392 2365 ntBASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC144NLQ6NUI1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC144NLQ6NUI1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
CCDC144NLQ6NUI1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC144NLQ6NUI1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.77□□□□□ -0.04
CCDC144NLQ6NUI1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC144NLQ6NUI1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CCDC144NLQ6NUI1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC144NLQ6NUI1 KRT89P-201ENST00000620027 1478 ntBASIC14.77□□□□□ -0.04
CCDC144NLQ6NUI1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC144NLQ6NUI1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CCDC144NLQ6NUI1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC144NLQ6NUI1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC144NLQ6NUI1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC144NLQ6NUI1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC144NLQ6NUI1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC144NLQ6NUI1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC144NLQ6NUI1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC144NLQ6NUI1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 HLA-F-220ENST00000434407 884 ntBASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 AC024563.2-201ENST00000603282 481 ntBASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 AC005082.1-201ENST00000413042 2259 ntBASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CCDC144NLQ6NUI1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC144NLQ6NUI1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC144NLQ6NUI1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC144NLQ6NUI1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC144NLQ6NUI1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC144NLQ6NUI1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC144NLQ6NUI1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC144NLQ6NUI1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC144NLQ6NUI1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.76□□□□□ -0.05
CCDC144NLQ6NUI1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC144NLQ6NUI1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CCDC144NLQ6NUI1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.76□□□□□ -0.05
CCDC144NLQ6NUI1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCDC144NLQ6NUI1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms