Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 RNA5SP416-201ENST00000516838 111 ntBASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 MTDHP4-201ENST00000600287 670 ntBASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 AL139424.1-201ENST00000607572 797 ntBASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LYSMD4Q5XG99 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 NKAPP1-205ENST00000585790 367 ntBASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 AC107918.4-202ENST00000641623 219 ntBASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LYSMD4Q5XG99 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 RPS8P6-201ENST00000426177 609 ntBASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 AP001160.2-201ENST00000596071 487 ntBASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LYSMD4Q5XG99 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 PMS2P2-201ENST00000425039 1128 ntBASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 AC004967.1-201ENST00000453589 447 ntBASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 AC112698.1-201ENST00000510299 916 ntBASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 UNC93B6-202ENST00000528242 690 ntBASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.8■□□□□ 0.44
LYSMD4Q5XG99 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms