Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 HLA-F-220ENST00000434407 884 ntBASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 AC091076.1-201ENST00000610741 619 ntBASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC39BQ5VTQ0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 MYLKP1-201ENST00000509077 1580 ntBASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 MIR149-201ENST00000384879 89 ntBASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 VENTXP5-201ENST00000523979 775 ntBASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 AC126763.1-201ENST00000552015 2118 ntBASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TTC39BQ5VTQ0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 AL391807.1-203ENST00000604392 2365 ntBASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 AC092597.1-201ENST00000487352 616 ntBASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 FAM86EP-206ENST00000510506 987 ntBASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 AC079602.3-201ENST00000623931 403 ntBASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 PCDHB18P-201ENST00000524813 2368 ntBASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.97■□□□□ 0.63
TTC39BQ5VTQ0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC39BQ5VTQ0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms