Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
VARS2Q5ST30 AP002469.2-201ENST00000531724 424 ntBASIC19.24■□□□□ 0.67
VARS2Q5ST30 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.24■□□□□ 0.67
VARS2Q5ST30 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VARS2Q5ST30 MIR5100-201ENST00000579544 119 ntBASIC19.24■□□□□ 0.67
VARS2Q5ST30 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
VARS2Q5ST30 AL591684.3-201ENST00000605187 298 ntBASIC19.24■□□□□ 0.67
VARS2Q5ST30 AC114341.1-201ENST00000618070 349 ntBASIC19.24■□□□□ 0.67
VARS2Q5ST30 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARS2Q5ST30 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARS2Q5ST30 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARS2Q5ST30 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.24■□□□□ 0.67
VARS2Q5ST30 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VARS2Q5ST30 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARS2Q5ST30 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARS2Q5ST30 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VARS2Q5ST30 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.23■□□□□ 0.67
VARS2Q5ST30 CROCCP3-202ENST00000420820 1947 ntBASIC19.23■□□□□ 0.67
VARS2Q5ST30 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.23■□□□□ 0.67
VARS2Q5ST30 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARS2Q5ST30 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VARS2Q5ST30 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VARS2Q5ST30 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARS2Q5ST30 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARS2Q5ST30 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARS2Q5ST30 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VARS2Q5ST30 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.23■□□□□ 0.67
VARS2Q5ST30 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARS2Q5ST30 KRT18P65-201ENST00000439811 1286 ntBASIC19.23■□□□□ 0.67
VARS2Q5ST30 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.23■□□□□ 0.67
VARS2Q5ST30 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.23■□□□□ 0.67
VARS2Q5ST30 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.23■□□□□ 0.67
VARS2Q5ST30 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.23■□□□□ 0.67
VARS2Q5ST30 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.23■□□□□ 0.67
VARS2Q5ST30 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.23■□□□□ 0.67
VARS2Q5ST30 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.23■□□□□ 0.67
VARS2Q5ST30 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARS2Q5ST30 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
VARS2Q5ST30 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.23■□□□□ 0.67
VARS2Q5ST30 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARS2Q5ST30 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.23■□□□□ 0.67
VARS2Q5ST30 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VARS2Q5ST30 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARS2Q5ST30 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARS2Q5ST30 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
VARS2Q5ST30 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARS2Q5ST30 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
VARS2Q5ST30 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VARS2Q5ST30 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARS2Q5ST30 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARS2Q5ST30 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARS2Q5ST30 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VARS2Q5ST30 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.22■□□□□ 0.67
VARS2Q5ST30 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARS2Q5ST30 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VARS2Q5ST30 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARS2Q5ST30 AF238378.1-201ENST00000526806 358 ntBASIC19.22■□□□□ 0.67
VARS2Q5ST30 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.22■□□□□ 0.67
VARS2Q5ST30 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.22■□□□□ 0.67
VARS2Q5ST30 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
VARS2Q5ST30 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
VARS2Q5ST30 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VARS2Q5ST30 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.22■□□□□ 0.67
VARS2Q5ST30 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARS2Q5ST30 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARS2Q5ST30 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARS2Q5ST30 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.22■□□□□ 0.67
VARS2Q5ST30 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARS2Q5ST30 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VARS2Q5ST30 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
VARS2Q5ST30 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARS2Q5ST30 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARS2Q5ST30 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARS2Q5ST30 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARS2Q5ST30 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARS2Q5ST30 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARS2Q5ST30 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
VARS2Q5ST30 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.21■□□□□ 0.67
VARS2Q5ST30 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.21■□□□□ 0.67
VARS2Q5ST30 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
VARS2Q5ST30 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARS2Q5ST30 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARS2Q5ST30 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARS2Q5ST30 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARS2Q5ST30 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
VARS2Q5ST30 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
VARS2Q5ST30 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARS2Q5ST30 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARS2Q5ST30 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.21■□□□□ 0.67
VARS2Q5ST30 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VARS2Q5ST30 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
VARS2Q5ST30 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARS2Q5ST30 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.21■□□□□ 0.67
VARS2Q5ST30 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
VARS2Q5ST30 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARS2Q5ST30 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
VARS2Q5ST30 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARS2Q5ST30 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARS2Q5ST30 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.21■□□□□ 0.67
VARS2Q5ST30 TP73-AS1-210ENST00000637775 1455 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms