Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 AC093010.1-201ENST00000473625 1624 ntBASIC19■□□□□ 0.63
ATP13A4Q4VNC1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATP13A4Q4VNC1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 ECEL1P3-201ENST00000427961 737 ntBASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 MIR3180-4-201ENST00000582223 153 ntBASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 AL138966.2-201ENST00000621997 464 ntBASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATP13A4Q4VNC1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 AC145285.6-201ENST00000604632 637 ntBASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 AL157888.1-201ENST00000631930 593 ntBASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 AC012317.2-201ENST00000623305 2251 ntBASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATP13A4Q4VNC1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 AC010203.1-204ENST00000548782 407 ntBASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 MIR3917-201ENST00000580971 93 ntBASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 AC141257.4-201ENST00000634557 245 ntBASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 AC136944.6-201ENST00000634818 245 ntBASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP13A4Q4VNC1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms