Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC244107.1-201ENST00000442033 332 ntBASIC31.86■■■□□ 2.69
HMGXB3Q12766 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC31.86■■■□□ 2.69
HMGXB3Q12766 AL513210.1-201ENST00000629608 234 ntBASIC31.86■■■□□ 2.69
HMGXB3Q12766 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC31.86■■■□□ 2.69
HMGXB3Q12766 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC31.86■■■□□ 2.69
HMGXB3Q12766 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
HMGXB3Q12766 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC31.86■■■□□ 2.69
HMGXB3Q12766 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
HMGXB3Q12766 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
HMGXB3Q12766 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
HMGXB3Q12766 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC31.85■■■□□ 2.69
HMGXB3Q12766 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC31.85■■■□□ 2.69
HMGXB3Q12766 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC31.85■■■□□ 2.69
HMGXB3Q12766 AC093512.1-201ENST00000617969 520 ntBASIC31.85■■■□□ 2.69
HMGXB3Q12766 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC31.85■■■□□ 2.69
HMGXB3Q12766 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
HMGXB3Q12766 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC31.85■■■□□ 2.69
HMGXB3Q12766 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
HMGXB3Q12766 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
HMGXB3Q12766 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
HMGXB3Q12766 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
HMGXB3Q12766 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC31.85■■■□□ 2.69
HMGXB3Q12766 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC31.85■■■□□ 2.69
HMGXB3Q12766 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC31.85■■■□□ 2.69
HMGXB3Q12766 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
HMGXB3Q12766 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC31.85■■■□□ 2.69
HMGXB3Q12766 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC31.85■■■□□ 2.69
HMGXB3Q12766 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
HMGXB3Q12766 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
HMGXB3Q12766 AC004817.3-201ENST00000602957 2129 ntBASIC31.84■■■□□ 2.69
HMGXB3Q12766 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
HMGXB3Q12766 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
HMGXB3Q12766 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
HMGXB3Q12766 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
HMGXB3Q12766 AC148477.5-201ENST00000625164 1645 ntBASIC31.84■■■□□ 2.69
HMGXB3Q12766 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
HMGXB3Q12766 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
HMGXB3Q12766 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC31.84■■■□□ 2.69
HMGXB3Q12766 RPS15P9-201ENST00000494093 319 ntBASIC31.84■■■□□ 2.69
HMGXB3Q12766 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC31.84■■■□□ 2.69
HMGXB3Q12766 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC31.84■■■□□ 2.69
HMGXB3Q12766 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC31.84■■■□□ 2.69
HMGXB3Q12766 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC31.84■■■□□ 2.69
HMGXB3Q12766 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
HMGXB3Q12766 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
HMGXB3Q12766 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
HMGXB3Q12766 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC31.83■■■□□ 2.69
HMGXB3Q12766 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC31.83■■■□□ 2.69
HMGXB3Q12766 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
HMGXB3Q12766 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
HMGXB3Q12766 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
HMGXB3Q12766 KRT8P47-201ENST00000604727 1398 ntBASIC31.83■■■□□ 2.69
HMGXB3Q12766 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
HMGXB3Q12766 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC31.83■■■□□ 2.69
HMGXB3Q12766 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
HMGXB3Q12766 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC31.83■■■□□ 2.69
HMGXB3Q12766 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
HMGXB3Q12766 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC31.83■■■□□ 2.69
HMGXB3Q12766 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
HMGXB3Q12766 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC31.83■■■□□ 2.69
HMGXB3Q12766 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
HMGXB3Q12766 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC31.83■■■□□ 2.69
HMGXB3Q12766 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC31.83■■■□□ 2.69
HMGXB3Q12766 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC31.82■■■□□ 2.69
HMGXB3Q12766 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC31.82■■■□□ 2.69
HMGXB3Q12766 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC31.82■■■□□ 2.69
HMGXB3Q12766 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
HMGXB3Q12766 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
HMGXB3Q12766 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
HMGXB3Q12766 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
HMGXB3Q12766 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
HMGXB3Q12766 AC112907.3-201ENST00000577781 2400 ntBASIC31.81■■■□□ 2.68
HMGXB3Q12766 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
HMGXB3Q12766 POLD4-207ENST00000531239 584 ntTSL 2 BASIC31.81■■■□□ 2.68
HMGXB3Q12766 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC31.81■■■□□ 2.68
HMGXB3Q12766 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
HMGXB3Q12766 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC31.81■■■□□ 2.68
HMGXB3Q12766 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC31.81■■■□□ 2.68
HMGXB3Q12766 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC31.81■■■□□ 2.68
HMGXB3Q12766 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC31.81■■■□□ 2.68
HMGXB3Q12766 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC31.81■■■□□ 2.68
HMGXB3Q12766 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC31.81■■■□□ 2.68
HMGXB3Q12766 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC31.81■■■□□ 2.68
HMGXB3Q12766 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
HMGXB3Q12766 PNKD-204ENST00000436005 978 ntTSL 5 BASIC31.8■■■□□ 2.68
HMGXB3Q12766 ACTG1P14-201ENST00000446382 1122 ntBASIC31.8■■■□□ 2.68
HMGXB3Q12766 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
HMGXB3Q12766 KRT19P2-202ENST00000557173 1012 ntBASIC31.8■■■□□ 2.68
HMGXB3Q12766 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC31.8■■■□□ 2.68
HMGXB3Q12766 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
HMGXB3Q12766 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC31.8■■■□□ 2.68
HMGXB3Q12766 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
HMGXB3Q12766 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC31.8■■■□□ 2.68
HMGXB3Q12766 SNAI3-AS1-205ENST00000568633 2096 ntBASIC31.8■■■□□ 2.68
HMGXB3Q12766 AL353593.2-201ENST00000602529 1483 ntBASIC31.8■■■□□ 2.68
HMGXB3Q12766 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
HMGXB3Q12766 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC31.8■■■□□ 2.68
HMGXB3Q12766 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
HMGXB3Q12766 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC31.8■■■□□ 2.68
HMGXB3Q12766 HLA-J-202ENST00000469281 1241 ntBASIC31.8■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms