Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL1Q00532 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKL1Q00532 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKL1Q00532 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.92■□□□□ 0.46
CDKL1Q00532 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CDKL1Q00532 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDKL1Q00532 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKL1Q00532 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL1Q00532 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CDKL1Q00532 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL1Q00532 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL1Q00532 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL1Q00532 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL1Q00532 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL1Q00532 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKL1Q00532 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.92■□□□□ 0.46
CDKL1Q00532 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CDKL1Q00532 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.92■□□□□ 0.46
CDKL1Q00532 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKL1Q00532 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.91■□□□□ 0.46
CDKL1Q00532 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDKL1Q00532 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKL1Q00532 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CDKL1Q00532 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.91■□□□□ 0.46
CDKL1Q00532 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKL1Q00532 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDKL1Q00532 AC009947.2-201ENST00000444014 672 ntBASIC17.91■□□□□ 0.46
CDKL1Q00532 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.91■□□□□ 0.46
CDKL1Q00532 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKL1Q00532 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKL1Q00532 AC145285.6-201ENST00000604632 637 ntBASIC17.91■□□□□ 0.46
CDKL1Q00532 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKL1Q00532 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
CDKL1Q00532 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKL1Q00532 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CDKL1Q00532 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
CDKL1Q00532 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKL1Q00532 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKL1Q00532 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKL1Q00532 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CDKL1Q00532 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL1Q00532 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL1Q00532 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.9■□□□□ 0.46
CDKL1Q00532 LINC00896-202ENST00000609602 2128 ntBASIC17.9■□□□□ 0.46
CDKL1Q00532 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL1Q00532 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL1Q00532 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL1Q00532 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL1Q00532 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL1Q00532 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
CDKL1Q00532 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL1Q00532 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL1Q00532 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.9■□□□□ 0.46
CDKL1Q00532 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.9■□□□□ 0.46
CDKL1Q00532 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL1Q00532 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL1Q00532 AP000523.1-201ENST00000398242 1049 ntBASIC17.9■□□□□ 0.46
CDKL1Q00532 AC087499.1-201ENST00000418141 1075 ntBASIC17.9■□□□□ 0.46
CDKL1Q00532 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL1Q00532 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL1Q00532 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.9■□□□□ 0.46
CDKL1Q00532 AC010240.3-201ENST00000607688 395 ntBASIC17.9■□□□□ 0.46
CDKL1Q00532 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.9■□□□□ 0.46
CDKL1Q00532 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL1Q00532 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CDKL1Q00532 PCDHA12-202ENST00000613593 2588 ntBASIC17.9■□□□□ 0.46
CDKL1Q00532 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.9■□□□□ 0.46
CDKL1Q00532 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.9■□□□□ 0.46
CDKL1Q00532 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL1Q00532 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL1Q00532 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL1Q00532 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDKL1Q00532 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CDKL1Q00532 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDKL1Q00532 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.89■□□□□ 0.46
CDKL1Q00532 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
CDKL1Q00532 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL1Q00532 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms