Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBX1P83916 AC008556.1-201ENST00000610908 2040 ntBASIC19.09■□□□□ 0.65
CBX1P83916 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CBX1P83916 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBX1P83916 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CBX1P83916 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CBX1P83916 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.09■□□□□ 0.65
CBX1P83916 RARRES2P1-201ENST00000474487 481 ntBASIC19.09■□□□□ 0.65
CBX1P83916 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.09■□□□□ 0.65
CBX1P83916 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CBX1P83916 AC011298.3-201ENST00000615796 283 ntBASIC19.09■□□□□ 0.65
CBX1P83916 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CBX1P83916 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBX1P83916 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CBX1P83916 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC19.09■□□□□ 0.65
CBX1P83916 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBX1P83916 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBX1P83916 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBX1P83916 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CBX1P83916 NFIC-211ENST00000641145 8399 ntBASIC19.09■□□□□ 0.65
CBX1P83916 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CBX1P83916 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CBX1P83916 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CBX1P83916 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CBX1P83916 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC19.08■□□□□ 0.65
CBX1P83916 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CBX1P83916 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CBX1P83916 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CBX1P83916 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.08■□□□□ 0.64
CBX1P83916 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CBX1P83916 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.64
CBX1P83916 AC133561.4-201ENST00000566112 224 ntBASIC19.08■□□□□ 0.64
CBX1P83916 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CBX1P83916 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CBX1P83916 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CBX1P83916 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CBX1P83916 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CBX1P83916 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CBX1P83916 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CBX1P83916 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CBX1P83916 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CBX1P83916 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CBX1P83916 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.07■□□□□ 0.64
CBX1P83916 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.07■□□□□ 0.64
CBX1P83916 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CBX1P83916 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CBX1P83916 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CBX1P83916 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CBX1P83916 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CBX1P83916 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.07■□□□□ 0.64
CBX1P83916 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CBX1P83916 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CBX1P83916 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CBX1P83916 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CBX1P83916 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.07■□□□□ 0.64
CBX1P83916 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CBX1P83916 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.07■□□□□ 0.64
CBX1P83916 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CBX1P83916 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.07■□□□□ 0.64
CBX1P83916 DUX4L19-201ENST00000557448 1267 ntBASIC19.07■□□□□ 0.64
CBX1P83916 AL512631.2-201ENST00000604634 923 ntBASIC19.07■□□□□ 0.64
CBX1P83916 AC120498.10-201ENST00000621827 505 ntBASIC19.07■□□□□ 0.64
CBX1P83916 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CBX1P83916 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CBX1P83916 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CBX1P83916 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CBX1P83916 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CBX1P83916 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CBX1P83916 AC087633.2-202ENST00000565166 1439 ntBASIC19.07■□□□□ 0.64
CBX1P83916 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.07■□□□□ 0.64
CBX1P83916 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CBX1P83916 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.06■□□□□ 0.64
CBX1P83916 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX1P83916 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CBX1P83916 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX1P83916 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.06■□□□□ 0.64
CBX1P83916 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX1P83916 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CBX1P83916 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.06■□□□□ 0.64
CBX1P83916 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX1P83916 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX1P83916 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.06■□□□□ 0.64
CBX1P83916 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX1P83916 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX1P83916 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CBX1P83916 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC19.06■□□□□ 0.64
CBX1P83916 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CBX1P83916 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX1P83916 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CBX1P83916 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CBX1P83916 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CBX1P83916 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CBX1P83916 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.05■□□□□ 0.64
CBX1P83916 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CBX1P83916 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CBX1P83916 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CBX1P83916 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CBX1P83916 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CBX1P83916 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CBX1P83916 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms