Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEP78395 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEP78395 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEP78395 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PRAMEP78395 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PRAMEP78395 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEP78395 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEP78395 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEP78395 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEP78395 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEP78395 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRAMEP78395 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.39■□□□□ 0.53
PRAMEP78395 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
PRAMEP78395 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEP78395 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.38■□□□□ 0.53
PRAMEP78395 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEP78395 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PRAMEP78395 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.38■□□□□ 0.53
PRAMEP78395 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEP78395 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEP78395 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.38■□□□□ 0.53
PRAMEP78395 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEP78395 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEP78395 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEP78395 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEP78395 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEP78395 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.38■□□□□ 0.53
PRAMEP78395 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.38■□□□□ 0.53
PRAMEP78395 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.38■□□□□ 0.53
PRAMEP78395 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.38■□□□□ 0.53
PRAMEP78395 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.38■□□□□ 0.53
PRAMEP78395 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.38■□□□□ 0.53
PRAMEP78395 MIR3180-4-201ENST00000582223 153 ntBASIC18.38■□□□□ 0.53
PRAMEP78395 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PRAMEP78395 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEP78395 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEP78395 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEP78395 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEP78395 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEP78395 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.38■□□□□ 0.53
PRAMEP78395 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEP78395 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEP78395 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEP78395 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEP78395 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEP78395 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PRAMEP78395 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEP78395 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PRAMEP78395 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEP78395 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEP78395 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRAMEP78395 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.37■□□□□ 0.53
PRAMEP78395 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.37■□□□□ 0.53
PRAMEP78395 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEP78395 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
PRAMEP78395 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEP78395 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.37■□□□□ 0.53
PRAMEP78395 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEP78395 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.37■□□□□ 0.53
PRAMEP78395 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEP78395 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEP78395 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.37■□□□□ 0.53
PRAMEP78395 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEP78395 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEP78395 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PRAMEP78395 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.37■□□□□ 0.53
PRAMEP78395 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEP78395 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.37■□□□□ 0.53
PRAMEP78395 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.37■□□□□ 0.53
PRAMEP78395 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.37■□□□□ 0.53
PRAMEP78395 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.37■□□□□ 0.53
PRAMEP78395 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.37■□□□□ 0.53
PRAMEP78395 AC145285.6-201ENST00000604632 637 ntBASIC18.37■□□□□ 0.53
PRAMEP78395 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.37■□□□□ 0.53
PRAMEP78395 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEP78395 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.37■□□□□ 0.53
PRAMEP78395 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.37■□□□□ 0.53
PRAMEP78395 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEP78395 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEP78395 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PRAMEP78395 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEP78395 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEP78395 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEP78395 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.37■□□□□ 0.53
PRAMEP78395 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEP78395 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.37■□□□□ 0.53
PRAMEP78395 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.37■□□□□ 0.53
PRAMEP78395 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRAMEP78395 NOC2LP1-202ENST00000452600 2235 ntBASIC18.37■□□□□ 0.53
PRAMEP78395 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEP78395 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEP78395 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRAMEP78395 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.36■□□□□ 0.53
PRAMEP78395 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
PRAMEP78395 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.36■□□□□ 0.53
PRAMEP78395 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PRAMEP78395 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
PRAMEP78395 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.36■□□□□ 0.53
PRAMEP78395 AP000523.1-201ENST00000398242 1049 ntBASIC18.36■□□□□ 0.53
PRAMEP78395 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms