Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HIST1H3AP68431 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.93■□□□□ 0.14
HIST1H3AP68431 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.93■□□□□ 0.14
HIST1H3AP68431 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H3AP68431 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.93■□□□□ 0.14
HIST1H3AP68431 AC133561.5-201ENST00000635547 218 ntBASIC15.93■□□□□ 0.14
HIST1H3AP68431 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
HIST1H3AP68431 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
HIST1H3AP68431 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H3AP68431 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
HIST1H3AP68431 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H3AP68431 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H3AP68431 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H3AP68431 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.93■□□□□ 0.14
HIST1H3AP68431 AC068880.1-201ENST00000507289 2297 ntBASIC15.93■□□□□ 0.14
HIST1H3AP68431 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H3AP68431 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
HIST1H3AP68431 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
HIST1H3AP68431 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.93■□□□□ 0.14
HIST1H3AP68431 AC073508.3-201ENST00000619697 1419 ntBASIC15.93■□□□□ 0.14
HIST1H3AP68431 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H3AP68431 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H3AP68431 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HIST1H3AP68431 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.93■□□□□ 0.14
HIST1H3AP68431 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.92■□□□□ 0.14
HIST1H3AP68431 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.92■□□□□ 0.14
HIST1H3AP68431 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.92■□□□□ 0.14
HIST1H3AP68431 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
HIST1H3AP68431 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.92■□□□□ 0.14
HIST1H3AP68431 AC113347.1-201ENST00000413321 391 ntBASIC15.92■□□□□ 0.14
HIST1H3AP68431 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.92■□□□□ 0.14
HIST1H3AP68431 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
HIST1H3AP68431 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.92■□□□□ 0.14
HIST1H3AP68431 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.92■□□□□ 0.14
HIST1H3AP68431 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.92■□□□□ 0.14
HIST1H3AP68431 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
HIST1H3AP68431 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HIST1H3AP68431 AL031432.5-201ENST00000641059 760 ntBASIC15.92■□□□□ 0.14
HIST1H3AP68431 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HIST1H3AP68431 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.92■□□□□ 0.14
HIST1H3AP68431 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HIST1H3AP68431 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.92■□□□□ 0.14
HIST1H3AP68431 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.92■□□□□ 0.14
HIST1H3AP68431 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HIST1H3AP68431 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
HIST1H3AP68431 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.91■□□□□ 0.14
HIST1H3AP68431 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.91■□□□□ 0.14
HIST1H3AP68431 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HIST1H3AP68431 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
HIST1H3AP68431 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.91■□□□□ 0.14
HIST1H3AP68431 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.91■□□□□ 0.14
HIST1H3AP68431 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
HIST1H3AP68431 COX11P1-201ENST00000489116 835 ntBASIC15.91■□□□□ 0.14
HIST1H3AP68431 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HIST1H3AP68431 AC008687.5-201ENST00000593746 558 ntBASIC15.91■□□□□ 0.14
HIST1H3AP68431 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.91■□□□□ 0.14
HIST1H3AP68431 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.91■□□□□ 0.14
HIST1H3AP68431 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HIST1H3AP68431 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.91■□□□□ 0.14
HIST1H3AP68431 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
HIST1H3AP68431 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST1H3AP68431 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms