Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
SRP54P61011 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SRP54P61011 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SRP54P61011 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SRP54P61011 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SRP54P61011 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SRP54P61011 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.95■□□□□ 0.46
SRP54P61011 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.95■□□□□ 0.46
SRP54P61011 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.95■□□□□ 0.46
SRP54P61011 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.95■□□□□ 0.46
SRP54P61011 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.95■□□□□ 0.46
SRP54P61011 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.95■□□□□ 0.46
SRP54P61011 AC074051.2-201ENST00000565115 352 ntBASIC17.95■□□□□ 0.46
SRP54P61011 AC111152.3-201ENST00000569699 673 ntBASIC17.95■□□□□ 0.46
SRP54P61011 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.95■□□□□ 0.46
SRP54P61011 Z69720.1-201ENST00000601483 472 ntBASIC17.95■□□□□ 0.46
SRP54P61011 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.95■□□□□ 0.46
SRP54P61011 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SRP54P61011 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRP54P61011 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.94■□□□□ 0.46
SRP54P61011 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRP54P61011 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRP54P61011 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.94■□□□□ 0.46
SRP54P61011 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRP54P61011 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.94■□□□□ 0.46
SRP54P61011 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRP54P61011 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SRP54P61011 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.94■□□□□ 0.46
SRP54P61011 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.94■□□□□ 0.46
SRP54P61011 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SRP54P61011 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.94■□□□□ 0.46
SRP54P61011 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.94■□□□□ 0.46
SRP54P61011 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.94■□□□□ 0.46
SRP54P61011 VENTXP7-201ENST00000475503 772 ntBASIC17.94■□□□□ 0.46
SRP54P61011 AC113404.2-201ENST00000507884 177 ntBASIC17.94■□□□□ 0.46
SRP54P61011 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.94■□□□□ 0.46
SRP54P61011 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRP54P61011 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.94■□□□□ 0.46
SRP54P61011 LINC00167-201ENST00000530583 1419 ntBASIC17.94■□□□□ 0.46
SRP54P61011 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRP54P61011 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SRP54P61011 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.94■□□□□ 0.46
SRP54P61011 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRP54P61011 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.94■□□□□ 0.46
SRP54P61011 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SRP54P61011 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRP54P61011 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SRP54P61011 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.94■□□□□ 0.46
SRP54P61011 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.93■□□□□ 0.46
SRP54P61011 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP54P61011 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.93■□□□□ 0.46
SRP54P61011 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SRP54P61011 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SRP54P61011 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SRP54P61011 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP54P61011 AL024508.2-201ENST00000607749 1894 ntBASIC17.93■□□□□ 0.46
SRP54P61011 ANO7L1-203ENST00000602586 1720 ntBASIC17.93■□□□□ 0.46
SRP54P61011 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SRP54P61011 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP54P61011 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP54P61011 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SRP54P61011 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.93■□□□□ 0.46
SRP54P61011 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SRP54P61011 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SRP54P61011 FOSL1P1-201ENST00000511041 816 ntBASIC17.93■□□□□ 0.46
SRP54P61011 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP54P61011 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.93■□□□□ 0.46
SRP54P61011 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.93■□□□□ 0.46
SRP54P61011 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.93■□□□□ 0.46
SRP54P61011 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
SRP54P61011 AL121772.3-201ENST00000610840 674 ntBASIC17.93■□□□□ 0.46
SRP54P61011 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.93■□□□□ 0.46
SRP54P61011 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SRP54P61011 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.93■□□□□ 0.46
SRP54P61011 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP54P61011 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP54P61011 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.93■□□□□ 0.46
SRP54P61011 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.93■□□□□ 0.46
SRP54P61011 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.93■□□□□ 0.46
SRP54P61011 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SRP54P61011 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.93■□□□□ 0.46
SRP54P61011 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms