Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDC42P60953 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDC42P60953 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDC42P60953 AC141586.5-201ENST00000624546 2050 ntBASIC16.68■□□□□ 0.26
CDC42P60953 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.68■□□□□ 0.26
CDC42P60953 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.68■□□□□ 0.26
CDC42P60953 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDC42P60953 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.68■□□□□ 0.26
CDC42P60953 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.68■□□□□ 0.26
CDC42P60953 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDC42P60953 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.68■□□□□ 0.26
CDC42P60953 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CDC42P60953 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.68■□□□□ 0.26
CDC42P60953 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.68■□□□□ 0.26
CDC42P60953 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.68■□□□□ 0.26
CDC42P60953 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDC42P60953 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42P60953 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.67■□□□□ 0.26
CDC42P60953 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CDC42P60953 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.67■□□□□ 0.26
CDC42P60953 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CDC42P60953 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.67■□□□□ 0.26
CDC42P60953 AL023806.1-201ENST00000603994 1649 ntBASIC16.67■□□□□ 0.26
CDC42P60953 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42P60953 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42P60953 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42P60953 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42P60953 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42P60953 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42P60953 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
CDC42P60953 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.67■□□□□ 0.26
CDC42P60953 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.67■□□□□ 0.26
CDC42P60953 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.67■□□□□ 0.26
CDC42P60953 AL138781.1-201ENST00000566567 1274 ntBASIC16.67■□□□□ 0.26
CDC42P60953 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.67■□□□□ 0.26
CDC42P60953 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CDC42P60953 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42P60953 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CDC42P60953 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42P60953 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42P60953 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.67■□□□□ 0.26
CDC42P60953 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.67■□□□□ 0.26
CDC42P60953 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42P60953 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42P60953 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.67■□□□□ 0.26
CDC42P60953 AD000864.1-201ENST00000624076 2295 ntBASIC16.67■□□□□ 0.26
CDC42P60953 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42P60953 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42P60953 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDC42P60953 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.67■□□□□ 0.26
CDC42P60953 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC42P60953 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CDC42P60953 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.66■□□□□ 0.26
CDC42P60953 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42P60953 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42P60953 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42P60953 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42P60953 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.66■□□□□ 0.26
CDC42P60953 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC42P60953 NCF1B-203ENST00000435988 1254 ntBASIC16.66■□□□□ 0.26
CDC42P60953 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CDC42P60953 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.66■□□□□ 0.26
CDC42P60953 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.66■□□□□ 0.26
CDC42P60953 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42P60953 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.66■□□□□ 0.26
CDC42P60953 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42P60953 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.66■□□□□ 0.26
CDC42P60953 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
CDC42P60953 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42P60953 PP12613-201ENST00000424958 2230 ntBASIC16.66■□□□□ 0.26
CDC42P60953 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42P60953 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42P60953 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42P60953 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42P60953 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42P60953 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.65■□□□□ 0.26
CDC42P60953 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms