Protein–RNA interactions for Protein: P59091

LINC00315, Putative uncharacterized protein encoded by LINC00315, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00315P59091 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
LINC00315P59091 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00315P59091 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LINC00315P59091 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 AC141586.5-201ENST00000624546 2050 ntBASIC13.13□□□□□ -0.31
LINC00315P59091 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00315P59091 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00315P59091 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00315P59091 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC00315P59091 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.13□□□□□ -0.31
LINC00315P59091 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LINC00315P59091 MESTP1-201ENST00000404287 994 ntBASIC13.13□□□□□ -0.31
LINC00315P59091 MIR1238-201ENST00000408483 83 ntBASIC13.13□□□□□ -0.31
LINC00315P59091 MCCD1P1-208ENST00000445732 328 ntBASIC13.13□□□□□ -0.31
LINC00315P59091 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.13□□□□□ -0.31
LINC00315P59091 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.13□□□□□ -0.31
LINC00315P59091 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.13□□□□□ -0.31
LINC00315P59091 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
LINC00315P59091 AP000692.2-201ENST00000608391 879 ntBASIC13.13□□□□□ -0.31
LINC00315P59091 MIR6786-201ENST00000616843 113 ntBASIC13.13□□□□□ -0.31
LINC00315P59091 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 AC099343.3-201ENST00000605834 2503 ntBASIC13.13□□□□□ -0.31
LINC00315P59091 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LINC00315P59091 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00315P59091 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00315P59091 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC00315P59091 AC093010.1-201ENST00000473625 1624 ntBASIC13.13□□□□□ -0.31
LINC00315P59091 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 AL163051.1-201ENST00000569214 1512 ntBASIC13.13□□□□□ -0.31
LINC00315P59091 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC00315P59091 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00315P59091 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00315P59091 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LINC00315P59091 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LINC00315P59091 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00315P59091 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00315P59091 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 FAM210CP-201ENST00000445714 574 ntBASIC13.12□□□□□ -0.31
LINC00315P59091 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00315P59091 KRT18P21-201ENST00000515767 1272 ntBASIC13.12□□□□□ -0.31
LINC00315P59091 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
LINC00315P59091 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00315P59091 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00315P59091 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
LINC00315P59091 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
LINC00315P59091 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.12□□□□□ -0.31
LINC00315P59091 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC00315P59091 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC00315P59091 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC00315P59091 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00315P59091 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00315P59091 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00315P59091 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC00315P59091 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00315P59091 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00315P59091 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LINC00315P59091 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LINC00315P59091 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00315P59091 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC00315P59091 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
LINC00315P59091 AC116562.2-201ENST00000507042 360 ntBASIC13.11□□□□□ -0.31
LINC00315P59091 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC00315P59091 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms