Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 TSPY7P-201ENST00000431358 1114 ntBASIC17.3■□□□□ 0.36
NR1H2P55055 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H2P55055 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.3■□□□□ 0.36
NR1H2P55055 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.3■□□□□ 0.36
NR1H2P55055 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.3■□□□□ 0.36
NR1H2P55055 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NR1H2P55055 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.3■□□□□ 0.36
NR1H2P55055 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H2P55055 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H2P55055 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H2P55055 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
NR1H2P55055 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H2P55055 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
NR1H2P55055 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H2P55055 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H2P55055 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NR1H2P55055 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.3■□□□□ 0.36
NR1H2P55055 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H2P55055 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H2P55055 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H2P55055 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NR1H2P55055 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
NR1H2P55055 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.29■□□□□ 0.36
NR1H2P55055 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NR1H2P55055 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NR1H2P55055 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.29■□□□□ 0.36
NR1H2P55055 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
NR1H2P55055 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
NR1H2P55055 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.29■□□□□ 0.36
NR1H2P55055 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
NR1H2P55055 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
NR1H2P55055 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.29■□□□□ 0.36
NR1H2P55055 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.29■□□□□ 0.36
NR1H2P55055 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 MIR1224-201ENST00000408193 85 ntBASIC17.29■□□□□ 0.36
NR1H2P55055 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.29■□□□□ 0.36
NR1H2P55055 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.29■□□□□ 0.36
NR1H2P55055 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.29■□□□□ 0.36
NR1H2P55055 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.29■□□□□ 0.36
NR1H2P55055 AC113410.3-201ENST00000623366 203 ntBASIC17.29■□□□□ 0.36
NR1H2P55055 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.29■□□□□ 0.36
NR1H2P55055 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
NR1H2P55055 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.29■□□□□ 0.36
NR1H2P55055 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NR1H2P55055 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.28■□□□□ 0.36
NR1H2P55055 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.28■□□□□ 0.36
NR1H2P55055 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H2P55055 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NR1H2P55055 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H2P55055 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.28■□□□□ 0.36
NR1H2P55055 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H2P55055 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H2P55055 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.28■□□□□ 0.36
NR1H2P55055 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H2P55055 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NR1H2P55055 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H2P55055 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H2P55055 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H2P55055 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NR1H2P55055 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NR1H2P55055 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H2P55055 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H2P55055 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.28■□□□□ 0.36
NR1H2P55055 BX088651.1-201ENST00000540551 451 ntBASIC17.28■□□□□ 0.36
NR1H2P55055 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.28■□□□□ 0.36
NR1H2P55055 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
NR1H2P55055 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H2P55055 LINC01023-201ENST00000606054 436 ntBASIC17.28■□□□□ 0.36
NR1H2P55055 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H2P55055 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H2P55055 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.28■□□□□ 0.36
NR1H2P55055 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H2P55055 SDHAP1-207ENST00000440850 2000 ntBASIC17.28■□□□□ 0.36
NR1H2P55055 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H2P55055 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H2P55055 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.28■□□□□ 0.36
NR1H2P55055 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.28■□□□□ 0.36
NR1H2P55055 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NR1H2P55055 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H2P55055 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms