Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDE1AP54750 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDE1AP54750 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC22.25■■□□□ 1.15
PDE1AP54750 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDE1AP54750 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDE1AP54750 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC22.25■■□□□ 1.15
PDE1AP54750 RNF152P1-201ENST00000397754 604 ntBASIC22.25■■□□□ 1.15
PDE1AP54750 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDE1AP54750 HLA-F-220ENST00000434407 884 ntBASIC22.25■■□□□ 1.15
PDE1AP54750 SLC25A6P5-201ENST00000435663 894 ntBASIC22.25■■□□□ 1.15
PDE1AP54750 AL136038.4-201ENST00000603606 1261 ntBASIC22.25■■□□□ 1.15
PDE1AP54750 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDE1AP54750 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDE1AP54750 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDE1AP54750 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PDE1AP54750 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC22.25■■□□□ 1.15
PDE1AP54750 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDE1AP54750 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDE1AP54750 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDE1AP54750 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PDE1AP54750 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDE1AP54750 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC22.25■■□□□ 1.15
PDE1AP54750 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
PDE1AP54750 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDE1AP54750 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
PDE1AP54750 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC22.24■■□□□ 1.15
PDE1AP54750 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PDE1AP54750 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDE1AP54750 HLA-DQB1-201ENST00000374943 1656 ntBASIC22.24■■□□□ 1.15
PDE1AP54750 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDE1AP54750 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.24■■□□□ 1.15
PDE1AP54750 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDE1AP54750 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.24■■□□□ 1.15
PDE1AP54750 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDE1AP54750 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC22.24■■□□□ 1.15
PDE1AP54750 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDE1AP54750 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDE1AP54750 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
PDE1AP54750 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDE1AP54750 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PDE1AP54750 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDE1AP54750 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDE1AP54750 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC22.24■■□□□ 1.15
PDE1AP54750 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC22.24■■□□□ 1.15
PDE1AP54750 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDE1AP54750 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC22.24■■□□□ 1.15
PDE1AP54750 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDE1AP54750 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDE1AP54750 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDE1AP54750 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC22.24■■□□□ 1.15
PDE1AP54750 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC22.24■■□□□ 1.15
PDE1AP54750 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDE1AP54750 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC22.23■■□□□ 1.15
PDE1AP54750 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
PDE1AP54750 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
PDE1AP54750 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDE1AP54750 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
PDE1AP54750 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PDE1AP54750 AK4P3-201ENST00000418260 669 ntBASIC22.23■■□□□ 1.15
PDE1AP54750 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC22.23■■□□□ 1.15
PDE1AP54750 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
PDE1AP54750 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC22.23■■□□□ 1.15
PDE1AP54750 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.23■■□□□ 1.15
PDE1AP54750 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.23■■□□□ 1.15
PDE1AP54750 RN7SL850P-201ENST00000579959 291 ntBASIC22.23■■□□□ 1.15
PDE1AP54750 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC22.23■■□□□ 1.15
PDE1AP54750 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC22.23■■□□□ 1.15
PDE1AP54750 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDE1AP54750 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PDE1AP54750 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
PDE1AP54750 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC22.23■■□□□ 1.15
PDE1AP54750 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDE1AP54750 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDE1AP54750 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDE1AP54750 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PDE1AP54750 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
PDE1AP54750 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
PDE1AP54750 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
PDE1AP54750 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDE1AP54750 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDE1AP54750 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC22.23■■□□□ 1.15
PDE1AP54750 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE1AP54750 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE1AP54750 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE1AP54750 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE1AP54750 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE1AP54750 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
PDE1AP54750 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE1AP54750 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC22.22■■□□□ 1.15
PDE1AP54750 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDE1AP54750 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE1AP54750 HES2-202ENST00000377836 507 ntTSL 2 BASIC22.22■■□□□ 1.15
PDE1AP54750 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC22.22■■□□□ 1.15
PDE1AP54750 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.22■■□□□ 1.15
PDE1AP54750 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22.22■■□□□ 1.15
PDE1AP54750 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE1AP54750 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
PDE1AP54750 DFFB-212ENST00000625756 649 ntTSL 5 BASIC22.22■■□□□ 1.15
PDE1AP54750 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE1AP54750 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms