Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 AC137695.1-201ENST00000604126 489 ntBASIC20.02■□□□□ 0.8
ATN1P54259 AC064836.3-201ENST00000607928 673 ntBASIC20.02■□□□□ 0.8
ATN1P54259 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATN1P54259 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATN1P54259 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATN1P54259 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATN1P54259 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATN1P54259 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.02■□□□□ 0.8
ATN1P54259 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
ATN1P54259 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
ATN1P54259 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATN1P54259 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
ATN1P54259 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ATN1P54259 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.02■□□□□ 0.79
ATN1P54259 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.02■□□□□ 0.79
ATN1P54259 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATN1P54259 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.01■□□□□ 0.79
ATN1P54259 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATN1P54259 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATN1P54259 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.01■□□□□ 0.79
ATN1P54259 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATN1P54259 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.01■□□□□ 0.79
ATN1P54259 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATN1P54259 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATN1P54259 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATN1P54259 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATN1P54259 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.01■□□□□ 0.79
ATN1P54259 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATN1P54259 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.01■□□□□ 0.79
ATN1P54259 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATN1P54259 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATN1P54259 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
ATN1P54259 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.01■□□□□ 0.79
ATN1P54259 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
ATN1P54259 RFPL4AP1-201ENST00000530883 850 ntBASIC20.01■□□□□ 0.79
ATN1P54259 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
ATN1P54259 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.01■□□□□ 0.79
ATN1P54259 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.01■□□□□ 0.79
ATN1P54259 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.01■□□□□ 0.79
ATN1P54259 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.01■□□□□ 0.79
ATN1P54259 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATN1P54259 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
ATN1P54259 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATN1P54259 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ATN1P54259 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATN1P54259 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20■□□□□ 0.79
ATN1P54259 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATN1P54259 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATN1P54259 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ATN1P54259 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ATN1P54259 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATN1P54259 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATN1P54259 LAGE3P1-201ENST00000425356 484 ntBASIC20■□□□□ 0.79
ATN1P54259 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATN1P54259 BX005266.1-201ENST00000473402 457 ntBASIC20■□□□□ 0.79
ATN1P54259 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20■□□□□ 0.79
ATN1P54259 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20■□□□□ 0.79
ATN1P54259 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20■□□□□ 0.79
ATN1P54259 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20■□□□□ 0.79
ATN1P54259 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATN1P54259 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20■□□□□ 0.79
ATN1P54259 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATN1P54259 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20■□□□□ 0.79
ATN1P54259 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20■□□□□ 0.79
ATN1P54259 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
ATN1P54259 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATN1P54259 AL024508.2-201ENST00000607749 1894 ntBASIC20■□□□□ 0.79
ATN1P54259 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ATN1P54259 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATN1P54259 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20■□□□□ 0.79
ATN1P54259 SLC25A24-204ENST00000569674 2357 ntBASIC20■□□□□ 0.79
ATN1P54259 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATN1P54259 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATN1P54259 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATN1P54259 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATN1P54259 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATN1P54259 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATN1P54259 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATN1P54259 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
ATN1P54259 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATN1P54259 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATN1P54259 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATN1P54259 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
ATN1P54259 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATN1P54259 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.99■□□□□ 0.79
ATN1P54259 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATN1P54259 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.99■□□□□ 0.79
ATN1P54259 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.99■□□□□ 0.79
ATN1P54259 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATN1P54259 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATN1P54259 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATN1P54259 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ATN1P54259 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.99■□□□□ 0.79
ATN1P54259 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.99■□□□□ 0.79
ATN1P54259 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ATN1P54259 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.99■□□□□ 0.79
ATN1P54259 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.99■□□□□ 0.79
ATN1P54259 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.99■□□□□ 0.79
ATN1P54259 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
ATN1P54259 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms