Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX1P48742 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LHX1P48742 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
LHX1P48742 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
LHX1P48742 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
LHX1P48742 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LHX1P48742 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
LHX1P48742 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LHX1P48742 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX1P48742 PHGDH-209ENST00000641074 1780 ntBASIC19.25■□□□□ 0.67
LHX1P48742 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.25■□□□□ 0.67
LHX1P48742 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.25■□□□□ 0.67
LHX1P48742 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.25■□□□□ 0.67
LHX1P48742 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LHX1P48742 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX1P48742 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LHX1P48742 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.25■□□□□ 0.67
LHX1P48742 AC104819.1-201ENST00000504587 486 ntBASIC19.25■□□□□ 0.67
LHX1P48742 PRELID1P1-202ENST00000567272 903 ntBASIC19.25■□□□□ 0.67
LHX1P48742 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.25■□□□□ 0.67
LHX1P48742 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX1P48742 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.25■□□□□ 0.67
LHX1P48742 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.25■□□□□ 0.67
LHX1P48742 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX1P48742 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.25■□□□□ 0.67
LHX1P48742 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LHX1P48742 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LHX1P48742 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX1P48742 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX1P48742 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
LHX1P48742 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LHX1P48742 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.24■□□□□ 0.67
LHX1P48742 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.24■□□□□ 0.67
LHX1P48742 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.24■□□□□ 0.67
LHX1P48742 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.24■□□□□ 0.67
LHX1P48742 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
LHX1P48742 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LHX1P48742 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 DUSP5P1-201ENST00000441325 1139 ntBASIC19.24■□□□□ 0.67
LHX1P48742 KRT17P6-201ENST00000453795 1220 ntBASIC19.24■□□□□ 0.67
LHX1P48742 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.24■□□□□ 0.67
LHX1P48742 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.24■□□□□ 0.67
LHX1P48742 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.24■□□□□ 0.67
LHX1P48742 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.24■□□□□ 0.67
LHX1P48742 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.24■□□□□ 0.67
LHX1P48742 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.24■□□□□ 0.67
LHX1P48742 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.24■□□□□ 0.67
LHX1P48742 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.24■□□□□ 0.67
LHX1P48742 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.24■□□□□ 0.67
LHX1P48742 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LHX1P48742 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.24■□□□□ 0.67
LHX1P48742 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LHX1P48742 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX1P48742 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX1P48742 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.23■□□□□ 0.67
LHX1P48742 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.23■□□□□ 0.67
LHX1P48742 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.23■□□□□ 0.67
LHX1P48742 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LHX1P48742 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX1P48742 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX1P48742 AC093010.1-201ENST00000473625 1624 ntBASIC19.23■□□□□ 0.67
LHX1P48742 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX1P48742 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LHX1P48742 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
LHX1P48742 AL845331.1-201ENST00000424978 1190 ntBASIC19.23■□□□□ 0.67
LHX1P48742 MTCL1P1-201ENST00000446207 792 ntBASIC19.23■□□□□ 0.67
LHX1P48742 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LHX1P48742 KRT126P-201ENST00000549467 1181 ntBASIC19.23■□□□□ 0.67
LHX1P48742 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.23■□□□□ 0.67
LHX1P48742 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.23■□□□□ 0.67
LHX1P48742 AC074051.2-201ENST00000565115 352 ntBASIC19.23■□□□□ 0.67
LHX1P48742 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
LHX1P48742 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.23■□□□□ 0.67
LHX1P48742 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms