Protein–RNA interactions for Protein: P42772

CDKN2B, Cyclin-dependent kinase 4 inhibitor B, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2BP42772 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CDKN2BP42772 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2BP42772 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CDKN2BP42772 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2BP42772 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2BP42772 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
CDKN2BP42772 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CDKN2BP42772 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.85■□□□□ 0.61
CDKN2BP42772 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2BP42772 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.85■□□□□ 0.61
CDKN2BP42772 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.85■□□□□ 0.61
CDKN2BP42772 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.85■□□□□ 0.61
CDKN2BP42772 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.85■□□□□ 0.61
CDKN2BP42772 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.85■□□□□ 0.61
CDKN2BP42772 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.85■□□□□ 0.61
CDKN2BP42772 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2BP42772 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CDKN2BP42772 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2BP42772 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2BP42772 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2BP42772 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2BP42772 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2BP42772 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CDKN2BP42772 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2BP42772 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDKN2BP42772 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN2BP42772 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN2BP42772 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN2BP42772 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKN2BP42772 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN2BP42772 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CDKN2BP42772 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN2BP42772 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN2BP42772 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN2BP42772 AC012317.2-201ENST00000623305 2251 ntBASIC18.84■□□□□ 0.61
CDKN2BP42772 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKN2BP42772 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN2BP42772 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CDKN2BP42772 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDKN2BP42772 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKN2BP42772 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CDKN2BP42772 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKN2BP42772 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN2BP42772 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKN2BP42772 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CDKN2BP42772 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.84■□□□□ 0.61
CDKN2BP42772 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKN2BP42772 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.84■□□□□ 0.61
CDKN2BP42772 AC066615.1-201ENST00000640911 628 ntBASIC18.84■□□□□ 0.61
CDKN2BP42772 AC132938.6-201ENST00000623828 1655 ntBASIC18.84■□□□□ 0.61
CDKN2BP42772 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.84■□□□□ 0.61
CDKN2BP42772 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
CDKN2BP42772 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDKN2BP42772 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN2BP42772 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKN2BP42772 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.84■□□□□ 0.61
CDKN2BP42772 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDKN2BP42772 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDKN2BP42772 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CDKN2BP42772 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.83■□□□□ 0.61
CDKN2BP42772 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CDKN2BP42772 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.83■□□□□ 0.61
CDKN2BP42772 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDKN2BP42772 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDKN2BP42772 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDKN2BP42772 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDKN2BP42772 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDKN2BP42772 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.83■□□□□ 0.61
CDKN2BP42772 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDKN2BP42772 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDKN2BP42772 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDKN2BP42772 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDKN2BP42772 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDKN2BP42772 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.83■□□□□ 0.6
CDKN2BP42772 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.83■□□□□ 0.6
CDKN2BP42772 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CDKN2BP42772 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.83■□□□□ 0.6
CDKN2BP42772 AC092865.7-201ENST00000641832 219 ntBASIC18.83■□□□□ 0.6
CDKN2BP42772 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDKN2BP42772 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDKN2BP42772 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDKN2BP42772 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CDKN2BP42772 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CDKN2BP42772 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CDKN2BP42772 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN2BP42772 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.82■□□□□ 0.6
CDKN2BP42772 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN2BP42772 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.82■□□□□ 0.6
CDKN2BP42772 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.82■□□□□ 0.6
CDKN2BP42772 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN2BP42772 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN2BP42772 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN2BP42772 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN2BP42772 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN2BP42772 KRT18P22-201ENST00000402024 1347 ntBASIC18.82■□□□□ 0.6
CDKN2BP42772 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN2BP42772 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN2BP42772 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKN2BP42772 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CDKN2BP42772 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms