Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSP1P33241 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LSP1P33241 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.3■□□□□ 0.52
LSP1P33241 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSP1P33241 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSP1P33241 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.29■□□□□ 0.52
LSP1P33241 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSP1P33241 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.29■□□□□ 0.52
LSP1P33241 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LSP1P33241 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.29■□□□□ 0.52
LSP1P33241 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
LSP1P33241 HTR7P1-201ENST00000538670 1336 ntBASIC18.29■□□□□ 0.52
LSP1P33241 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LSP1P33241 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LSP1P33241 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.29■□□□□ 0.52
LSP1P33241 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LSP1P33241 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.29■□□□□ 0.52
LSP1P33241 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
LSP1P33241 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.29■□□□□ 0.52
LSP1P33241 KRT18P41-201ENST00000518924 1277 ntBASIC18.29■□□□□ 0.52
LSP1P33241 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.29■□□□□ 0.52
LSP1P33241 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.29■□□□□ 0.52
LSP1P33241 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LSP1P33241 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.29■□□□□ 0.52
LSP1P33241 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.29■□□□□ 0.52
LSP1P33241 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.29■□□□□ 0.52
LSP1P33241 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.29■□□□□ 0.52
LSP1P33241 OR10C1-204ENST00000622521 1039 ntBASIC18.29■□□□□ 0.52
LSP1P33241 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LSP1P33241 AC006557.6-201ENST00000623071 864 ntBASIC18.29■□□□□ 0.52
LSP1P33241 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.29■□□□□ 0.52
LSP1P33241 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LSP1P33241 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LSP1P33241 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSP1P33241 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LSP1P33241 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSP1P33241 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.29■□□□□ 0.52
LSP1P33241 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LSP1P33241 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LSP1P33241 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LSP1P33241 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSP1P33241 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSP1P33241 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.29■□□□□ 0.52
LSP1P33241 LINC02199-201ENST00000506655 2702 ntBASIC18.29■□□□□ 0.52
LSP1P33241 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSP1P33241 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.28■□□□□ 0.52
LSP1P33241 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.28■□□□□ 0.52
LSP1P33241 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSP1P33241 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSP1P33241 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.28■□□□□ 0.52
LSP1P33241 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.28■□□□□ 0.52
LSP1P33241 LSM12P1-201ENST00000411836 588 ntBASIC18.28■□□□□ 0.52
LSP1P33241 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.28■□□□□ 0.52
LSP1P33241 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.28■□□□□ 0.52
LSP1P33241 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.28■□□□□ 0.52
LSP1P33241 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.28■□□□□ 0.52
LSP1P33241 AL137784.2-201ENST00000607332 1000 ntBASIC18.28■□□□□ 0.52
LSP1P33241 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.28■□□□□ 0.52
LSP1P33241 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSP1P33241 KRT8P3-201ENST00000519669 1449 ntBASIC18.28■□□□□ 0.52
LSP1P33241 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LSP1P33241 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LSP1P33241 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSP1P33241 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LSP1P33241 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
LSP1P33241 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LSP1P33241 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LSP1P33241 KRT8P41-201ENST00000533985 1514 ntBASIC18.28■□□□□ 0.52
LSP1P33241 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LSP1P33241 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSP1P33241 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.28■□□□□ 0.52
LSP1P33241 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LSP1P33241 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.28■□□□□ 0.52
LSP1P33241 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.27■□□□□ 0.52
LSP1P33241 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.27■□□□□ 0.52
LSP1P33241 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.27■□□□□ 0.52
LSP1P33241 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSP1P33241 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LSP1P33241 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LSP1P33241 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSP1P33241 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSP1P33241 PKD1P1-201ENST00000458669 6805 ntBASIC18.27■□□□□ 0.52
LSP1P33241 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSP1P33241 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSP1P33241 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSP1P33241 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LSP1P33241 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LSP1P33241 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.27■□□□□ 0.52
LSP1P33241 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
LSP1P33241 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSP1P33241 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LSP1P33241 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LSP1P33241 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.27■□□□□ 0.52
LSP1P33241 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.27■□□□□ 0.52
LSP1P33241 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LSP1P33241 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.27■□□□□ 0.52
LSP1P33241 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.27■□□□□ 0.52
LSP1P33241 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LSP1P33241 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.27■□□□□ 0.52
LSP1P33241 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms