Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTR1BP28222 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HTR1BP28222 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.15■□□□□ 0.5
HTR1BP28222 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTR1BP28222 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTR1BP28222 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HTR1BP28222 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTR1BP28222 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTR1BP28222 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.15■□□□□ 0.5
HTR1BP28222 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HTR1BP28222 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTR1BP28222 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HTR1BP28222 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.15■□□□□ 0.5
HTR1BP28222 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.15■□□□□ 0.5
HTR1BP28222 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.15■□□□□ 0.5
HTR1BP28222 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
HTR1BP28222 KRT89P-201ENST00000620027 1478 ntBASIC18.14■□□□□ 0.5
HTR1BP28222 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTR1BP28222 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTR1BP28222 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTR1BP28222 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTR1BP28222 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HTR1BP28222 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HTR1BP28222 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTR1BP28222 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTR1BP28222 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTR1BP28222 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.14■□□□□ 0.49
HTR1BP28222 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTR1BP28222 MIR149-201ENST00000384879 89 ntBASIC18.14■□□□□ 0.49
HTR1BP28222 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.14■□□□□ 0.49
HTR1BP28222 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.14■□□□□ 0.49
HTR1BP28222 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HTR1BP28222 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.14■□□□□ 0.49
HTR1BP28222 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
HTR1BP28222 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTR1BP28222 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.14■□□□□ 0.49
HTR1BP28222 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.14■□□□□ 0.49
HTR1BP28222 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
HTR1BP28222 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTR1BP28222 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
HTR1BP28222 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTR1BP28222 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HTR1BP28222 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HTR1BP28222 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HTR1BP28222 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.13■□□□□ 0.49
HTR1BP28222 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTR1BP28222 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTR1BP28222 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HTR1BP28222 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTR1BP28222 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTR1BP28222 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HTR1BP28222 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTR1BP28222 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.13■□□□□ 0.49
HTR1BP28222 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.13■□□□□ 0.49
HTR1BP28222 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.13■□□□□ 0.49
HTR1BP28222 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HTR1BP28222 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.13■□□□□ 0.49
HTR1BP28222 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.13■□□□□ 0.49
HTR1BP28222 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HTR1BP28222 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTR1BP28222 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTR1BP28222 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.13■□□□□ 0.49
HTR1BP28222 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HTR1BP28222 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTR1BP28222 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTR1BP28222 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTR1BP28222 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
HTR1BP28222 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HTR1BP28222 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.12■□□□□ 0.49
HTR1BP28222 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTR1BP28222 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTR1BP28222 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTR1BP28222 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTR1BP28222 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTR1BP28222 IGHGP-201ENST00000390555 1178 ntBASIC18.12■□□□□ 0.49
HTR1BP28222 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTR1BP28222 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
HTR1BP28222 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.12■□□□□ 0.49
HTR1BP28222 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.12■□□□□ 0.49
HTR1BP28222 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.12■□□□□ 0.49
HTR1BP28222 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.12■□□□□ 0.49
HTR1BP28222 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HTR1BP28222 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HTR1BP28222 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.12■□□□□ 0.49
HTR1BP28222 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.12■□□□□ 0.49
HTR1BP28222 PRELID1P1-202ENST00000567272 903 ntBASIC18.12■□□□□ 0.49
HTR1BP28222 AL390719.2-201ENST00000606993 987 ntBASIC18.12■□□□□ 0.49
HTR1BP28222 IGHV3-41-201ENST00000613121 348 ntBASIC18.12■□□□□ 0.49
HTR1BP28222 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTR1BP28222 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HTR1BP28222 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.12■□□□□ 0.49
HTR1BP28222 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HTR1BP28222 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTR1BP28222 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTR1BP28222 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HTR1BP28222 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTR1BP28222 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HTR1BP28222 AC009102.3-201ENST00000623118 1491 ntBASIC18.12■□□□□ 0.49
HTR1BP28222 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HTR1BP28222 MYLKP1-201ENST00000509077 1580 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms