Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 ACTG1P14-201ENST00000446382 1122 ntBASIC15.24■□□□□ 0.03
APCP25054 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APCP25054 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APCP25054 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APCP25054 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APCP25054 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APCP25054 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.23■□□□□ 0.03
APCP25054 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
APCP25054 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.23■□□□□ 0.03
APCP25054 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.23■□□□□ 0.03
APCP25054 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.23■□□□□ 0.03
APCP25054 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.23■□□□□ 0.03
APCP25054 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.23■□□□□ 0.03
APCP25054 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.23■□□□□ 0.03
APCP25054 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
APCP25054 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APCP25054 LINC00602-201ENST00000629776 2065 ntBASIC15.23■□□□□ 0.03
APCP25054 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.23■□□□□ 0.03
APCP25054 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APCP25054 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APCP25054 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.23■□□□□ 0.03
APCP25054 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.23■□□□□ 0.03
APCP25054 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APCP25054 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APCP25054 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
APCP25054 AC093520.2-201ENST00000561830 333 ntBASIC15.23■□□□□ 0.03
APCP25054 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APCP25054 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.23■□□□□ 0.03
APCP25054 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APCP25054 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.23■□□□□ 0.03
APCP25054 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.23■□□□□ 0.03
APCP25054 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.23■□□□□ 0.03
APCP25054 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APCP25054 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APCP25054 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APCP25054 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
APCP25054 AP002414.1-201ENST00000391405 1147 ntBASIC15.22■□□□□ 0.03
APCP25054 AC004461.1-201ENST00000412461 403 ntBASIC15.22■□□□□ 0.03
APCP25054 IGLL3P-201ENST00000412472 434 ntBASIC15.22■□□□□ 0.03
APCP25054 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.22■□□□□ 0.03
APCP25054 UGT1A2P-201ENST00000454886 866 ntBASIC15.22■□□□□ 0.03
APCP25054 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
APCP25054 AC051619.7-201ENST00000568314 623 ntBASIC15.22■□□□□ 0.03
APCP25054 AL589182.2-201ENST00000619332 1049 ntBASIC15.22■□□□□ 0.03
APCP25054 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
APCP25054 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APCP25054 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APCP25054 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APCP25054 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.22■□□□□ 0.03
APCP25054 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
APCP25054 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.22■□□□□ 0.03
APCP25054 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APCP25054 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.22■□□□□ 0.03
APCP25054 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APCP25054 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.22■□□□□ 0.03
APCP25054 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APCP25054 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.22■□□□□ 0.03
APCP25054 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
APCP25054 TCF3P1-201ENST00000423021 1937 ntBASIC15.22■□□□□ 0.03
APCP25054 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APCP25054 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APCP25054 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.22■□□□□ 0.03
APCP25054 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APCP25054 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APCP25054 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APCP25054 AC055876.3-201ENST00000431496 288 ntBASIC15.21■□□□□ 0.03
APCP25054 TSPY16P-201ENST00000449843 468 ntBASIC15.21■□□□□ 0.03
APCP25054 AC023141.5-201ENST00000458585 616 ntBASIC15.21■□□□□ 0.03
APCP25054 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.21■□□□□ 0.03
APCP25054 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.21■□□□□ 0.03
APCP25054 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.21■□□□□ 0.03
APCP25054 AC138649.4-201ENST00000612222 287 ntBASIC15.21■□□□□ 0.03
APCP25054 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.21■□□□□ 0.03
APCP25054 LINC00628-201ENST00000628516 1289 ntBASIC15.21■□□□□ 0.03
APCP25054 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APCP25054 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.21■□□□□ 0.03
APCP25054 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APCP25054 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APCP25054 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APCP25054 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APCP25054 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APCP25054 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APCP25054 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APCP25054 OR8S1-201ENST00000310194 1080 ntBASIC15.21■□□□□ 0.03
APCP25054 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.21■□□□□ 0.03
APCP25054 CRYGEP-201ENST00000412192 528 ntBASIC15.21■□□□□ 0.03
APCP25054 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APCP25054 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.21■□□□□ 0.03
APCP25054 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.21■□□□□ 0.03
APCP25054 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APCP25054 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.21■□□□□ 0.03
APCP25054 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
APCP25054 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
APCP25054 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
APCP25054 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.21■□□□□ 0.02
APCP25054 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.21■□□□□ 0.02
APCP25054 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
APCP25054 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
APCP25054 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.21■□□□□ 0.02
APCP25054 PCDHAC2-203ENST00000615316 3011 ntBASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms