Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCLP18206 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCLP18206 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
VCLP18206 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VCLP18206 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.33■□□□□ 0.52
VCLP18206 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.33■□□□□ 0.52
VCLP18206 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.33■□□□□ 0.52
VCLP18206 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.33■□□□□ 0.52
VCLP18206 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VCLP18206 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.33■□□□□ 0.52
VCLP18206 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.33■□□□□ 0.52
VCLP18206 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
VCLP18206 AC011558.1-201ENST00000623459 338 ntBASIC18.33■□□□□ 0.52
VCLP18206 AC112497.1-201ENST00000624824 639 ntBASIC18.33■□□□□ 0.52
VCLP18206 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCLP18206 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCLP18206 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
VCLP18206 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VCLP18206 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCLP18206 AC034236.2-201ENST00000606662 1610 ntBASIC18.33■□□□□ 0.52
VCLP18206 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.33■□□□□ 0.52
VCLP18206 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.33■□□□□ 0.52
VCLP18206 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCLP18206 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.33■□□□□ 0.52
VCLP18206 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
VCLP18206 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCLP18206 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VCLP18206 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.33■□□□□ 0.52
VCLP18206 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VCLP18206 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCLP18206 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
VCLP18206 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.32■□□□□ 0.52
VCLP18206 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
VCLP18206 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.32■□□□□ 0.52
VCLP18206 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
VCLP18206 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.32■□□□□ 0.52
VCLP18206 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.32■□□□□ 0.52
VCLP18206 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 AC063952.2-201ENST00000498792 1227 ntBASIC18.32■□□□□ 0.52
VCLP18206 AC034232.1-201ENST00000506026 1064 ntBASIC18.32■□□□□ 0.52
VCLP18206 AC022616.7-201ENST00000525383 220 ntBASIC18.32■□□□□ 0.52
VCLP18206 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.32■□□□□ 0.52
VCLP18206 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.32■□□□□ 0.52
VCLP18206 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
VCLP18206 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.32■□□□□ 0.52
VCLP18206 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
VCLP18206 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.32■□□□□ 0.52
VCLP18206 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.32■□□□□ 0.52
VCLP18206 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.32■□□□□ 0.52
VCLP18206 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VCLP18206 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
VCLP18206 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.31■□□□□ 0.52
VCLP18206 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VCLP18206 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.31■□□□□ 0.52
VCLP18206 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.31■□□□□ 0.52
VCLP18206 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VCLP18206 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.31■□□□□ 0.52
VCLP18206 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VCLP18206 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCLP18206 KRT18P23-201ENST00000435622 1283 ntBASIC18.31■□□□□ 0.52
VCLP18206 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.31■□□□□ 0.52
VCLP18206 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.31■□□□□ 0.52
VCLP18206 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.31■□□□□ 0.52
VCLP18206 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.31■□□□□ 0.52
VCLP18206 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.31■□□□□ 0.52
VCLP18206 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.31■□□□□ 0.52
VCLP18206 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VCLP18206 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.31■□□□□ 0.52
VCLP18206 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VCLP18206 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VCLP18206 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
VCLP18206 AC099398.1-201ENST00000567919 2776 ntBASIC18.31■□□□□ 0.52
VCLP18206 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCLP18206 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCLP18206 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.31■□□□□ 0.52
VCLP18206 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.31■□□□□ 0.52
VCLP18206 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCLP18206 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
VCLP18206 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms