Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.25■□□□□ 0.35
NCK1P16333 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.25■□□□□ 0.35
NCK1P16333 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCK1P16333 CKBP1-201ENST00000565489 1086 ntBASIC17.25■□□□□ 0.35
NCK1P16333 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCK1P16333 AC008622.2-201ENST00000617006 1229 ntBASIC17.25■□□□□ 0.35
NCK1P16333 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.25■□□□□ 0.35
NCK1P16333 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NCK1P16333 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.25■□□□□ 0.35
NCK1P16333 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCK1P16333 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCK1P16333 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NCK1P16333 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCK1P16333 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.25■□□□□ 0.35
NCK1P16333 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NCK1P16333 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NCK1P16333 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
NCK1P16333 AC124067.4-201ENST00000519691 2379 ntBASIC17.24■□□□□ 0.35
NCK1P16333 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCK1P16333 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.24■□□□□ 0.35
NCK1P16333 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCK1P16333 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCK1P16333 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCK1P16333 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCK1P16333 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
NCK1P16333 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.24■□□□□ 0.35
NCK1P16333 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCK1P16333 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCK1P16333 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NCK1P16333 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
NCK1P16333 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.24■□□□□ 0.35
NCK1P16333 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.24■□□□□ 0.35
NCK1P16333 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
NCK1P16333 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.24■□□□□ 0.35
NCK1P16333 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.24■□□□□ 0.35
NCK1P16333 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.24■□□□□ 0.35
NCK1P16333 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCK1P16333 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.24■□□□□ 0.35
NCK1P16333 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCK1P16333 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCK1P16333 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCK1P16333 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.24■□□□□ 0.35
NCK1P16333 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.24■□□□□ 0.35
NCK1P16333 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCK1P16333 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCK1P16333 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.24■□□□□ 0.35
NCK1P16333 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NCK1P16333 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.24■□□□□ 0.35
NCK1P16333 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCK1P16333 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.24■□□□□ 0.35
NCK1P16333 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCK1P16333 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCK1P16333 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCK1P16333 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
NCK1P16333 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCK1P16333 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.23■□□□□ 0.35
NCK1P16333 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
NCK1P16333 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.23■□□□□ 0.35
NCK1P16333 KRT8P50-201ENST00000562022 1438 ntBASIC17.23■□□□□ 0.35
NCK1P16333 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NCK1P16333 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NCK1P16333 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCK1P16333 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCK1P16333 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCK1P16333 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.23■□□□□ 0.35
NCK1P16333 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
NCK1P16333 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NCK1P16333 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NCK1P16333 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.23■□□□□ 0.35
NCK1P16333 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NCK1P16333 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.23■□□□□ 0.35
NCK1P16333 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.23■□□□□ 0.35
NCK1P16333 AC142086.2-201ENST00000569753 217 ntBASIC17.23■□□□□ 0.35
NCK1P16333 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.23■□□□□ 0.35
NCK1P16333 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCK1P16333 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.23■□□□□ 0.35
NCK1P16333 AC011298.2-201ENST00000617989 482 ntBASIC17.23■□□□□ 0.35
NCK1P16333 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
NCK1P16333 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NCK1P16333 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCK1P16333 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.23■□□□□ 0.35
NCK1P16333 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NCK1P16333 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.23■□□□□ 0.35
NCK1P16333 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.23■□□□□ 0.35
NCK1P16333 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.23■□□□□ 0.35
NCK1P16333 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCK1P16333 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NCK1P16333 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.23■□□□□ 0.35
NCK1P16333 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NCK1P16333 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.23■□□□□ 0.35
NCK1P16333 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCK1P16333 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.23■□□□□ 0.35
NCK1P16333 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCK1P16333 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.23■□□□□ 0.35
NCK1P16333 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NCK1P16333 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NCK1P16333 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCK1P16333 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.22■□□□□ 0.35
NCK1P16333 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms