Protein–RNA interactions for Protein: P12036

NEFH, Neurofilament heavy polypeptide, humanhuman

Predictions only

Length 1,026 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFHP12036 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEFHP12036 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.51■□□□□ 0.55
NEFHP12036 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.51■□□□□ 0.55
NEFHP12036 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEFHP12036 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.51■□□□□ 0.55
NEFHP12036 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.51■□□□□ 0.55
NEFHP12036 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.51■□□□□ 0.55
NEFHP12036 PRKY-204ENST00000533551 1019 ntBASIC18.51■□□□□ 0.55
NEFHP12036 AC098934.4-201ENST00000564127 592 ntBASIC18.51■□□□□ 0.55
NEFHP12036 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.51■□□□□ 0.55
NEFHP12036 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NEFHP12036 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.51■□□□□ 0.55
NEFHP12036 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.51■□□□□ 0.55
NEFHP12036 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEFHP12036 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
NEFHP12036 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NEFHP12036 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NEFHP12036 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEFHP12036 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEFHP12036 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.51■□□□□ 0.55
NEFHP12036 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEFHP12036 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.51■□□□□ 0.55
NEFHP12036 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NEFHP12036 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
NEFHP12036 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEFHP12036 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
NEFHP12036 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEFHP12036 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEFHP12036 REXO1L9P-201ENST00000604264 2108 ntBASIC18.5■□□□□ 0.55
NEFHP12036 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NEFHP12036 AC046158.3-201ENST00000624947 2558 ntBASIC18.5■□□□□ 0.55
NEFHP12036 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.5■□□□□ 0.55
NEFHP12036 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NEFHP12036 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
NEFHP12036 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEFHP12036 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEFHP12036 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NEFHP12036 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.5■□□□□ 0.55
NEFHP12036 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEFHP12036 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEFHP12036 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.5■□□□□ 0.55
NEFHP12036 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.5■□□□□ 0.55
NEFHP12036 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.5■□□□□ 0.55
NEFHP12036 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEFHP12036 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.5■□□□□ 0.55
NEFHP12036 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.5■□□□□ 0.55
NEFHP12036 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.5■□□□□ 0.55
NEFHP12036 AC068587.9-201ENST00000641814 219 ntBASIC18.5■□□□□ 0.55
NEFHP12036 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEFHP12036 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NEFHP12036 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEFHP12036 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.5■□□□□ 0.55
NEFHP12036 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NEFHP12036 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NEFHP12036 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
NEFHP12036 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
NEFHP12036 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.5■□□□□ 0.55
NEFHP12036 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEFHP12036 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NEFHP12036 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEFHP12036 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.5■□□□□ 0.55
NEFHP12036 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NEFHP12036 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NEFHP12036 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NEFHP12036 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.49■□□□□ 0.55
NEFHP12036 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.49■□□□□ 0.55
NEFHP12036 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEFHP12036 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
NEFHP12036 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEFHP12036 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.49■□□□□ 0.55
NEFHP12036 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEFHP12036 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEFHP12036 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NEFHP12036 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.49■□□□□ 0.55
NEFHP12036 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEFHP12036 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEFHP12036 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.49■□□□□ 0.55
NEFHP12036 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEFHP12036 AC069152.1-201ENST00000438030 544 ntBASIC18.49■□□□□ 0.55
NEFHP12036 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.49■□□□□ 0.55
NEFHP12036 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEFHP12036 HLA-A-209ENST00000638375 975 ntBASIC18.49■□□□□ 0.55
NEFHP12036 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.49■□□□□ 0.55
NEFHP12036 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEFHP12036 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.49■□□□□ 0.55
NEFHP12036 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.49■□□□□ 0.55
NEFHP12036 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NEFHP12036 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEFHP12036 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.49■□□□□ 0.55
NEFHP12036 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEFHP12036 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
NEFHP12036 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEFHP12036 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEFHP12036 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.49■□□□□ 0.55
NEFHP12036 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEFHP12036 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
NEFHP12036 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.49■□□□□ 0.55
NEFHP12036 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NEFHP12036 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NEFHP12036 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms