Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL139424.1-201ENST00000607572 797 ntBASIC31.75■■■□□ 2.67
TOP2AP11388 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC31.75■■■□□ 2.67
TOP2AP11388 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
TOP2AP11388 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
TOP2AP11388 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC31.74■■■□□ 2.67
TOP2AP11388 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
TOP2AP11388 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC31.74■■■□□ 2.67
TOP2AP11388 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
TOP2AP11388 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
TOP2AP11388 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
TOP2AP11388 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
TOP2AP11388 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
TOP2AP11388 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
TOP2AP11388 ELK2BP-201ENST00000415014 1224 ntBASIC31.74■■■□□ 2.67
TOP2AP11388 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC31.74■■■□□ 2.67
TOP2AP11388 AP006288.1-201ENST00000446065 395 ntBASIC31.74■■■□□ 2.67
TOP2AP11388 AC122714.2-201ENST00000502787 707 ntBASIC31.74■■■□□ 2.67
TOP2AP11388 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
TOP2AP11388 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
TOP2AP11388 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC31.73■■■□□ 2.67
TOP2AP11388 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
TOP2AP11388 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
TOP2AP11388 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
TOP2AP11388 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC31.73■■■□□ 2.67
TOP2AP11388 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
TOP2AP11388 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
TOP2AP11388 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
TOP2AP11388 ALG1L5P-201ENST00000482043 771 ntBASIC31.73■■■□□ 2.67
TOP2AP11388 MSRA-206ENST00000521209 814 ntTSL 3 BASIC31.73■■■□□ 2.67
TOP2AP11388 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC31.73■■■□□ 2.67
TOP2AP11388 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC31.73■■■□□ 2.67
TOP2AP11388 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC31.73■■■□□ 2.67
TOP2AP11388 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
TOP2AP11388 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
TOP2AP11388 AC097374.2-201ENST00000618617 1306 ntBASIC31.72■■■□□ 2.67
TOP2AP11388 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
TOP2AP11388 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
TOP2AP11388 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
TOP2AP11388 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
TOP2AP11388 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
TOP2AP11388 SPDYE21P-201ENST00000413323 827 ntBASIC31.72■■■□□ 2.67
TOP2AP11388 HNRNPA1P28-201ENST00000424481 961 ntBASIC31.72■■■□□ 2.67
TOP2AP11388 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC31.72■■■□□ 2.67
TOP2AP11388 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
TOP2AP11388 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC31.72■■■□□ 2.67
TOP2AP11388 AL022326.1-202ENST00000641533 845 ntBASIC31.72■■■□□ 2.67
TOP2AP11388 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
TOP2AP11388 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
TOP2AP11388 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
TOP2AP11388 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC31.71■■■□□ 2.67
TOP2AP11388 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
TOP2AP11388 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
TOP2AP11388 AC064836.3-201ENST00000607928 673 ntBASIC31.71■■■□□ 2.67
TOP2AP11388 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
TOP2AP11388 AC005082.1-201ENST00000413042 2259 ntBASIC31.71■■■□□ 2.67
TOP2AP11388 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
TOP2AP11388 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
TOP2AP11388 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC31.7■■■□□ 2.67
TOP2AP11388 AC108751.1-201ENST00000490852 363 ntBASIC31.7■■■□□ 2.67
TOP2AP11388 AC006557.2-201ENST00000592985 1240 ntBASIC31.7■■■□□ 2.67
TOP2AP11388 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC31.7■■■□□ 2.67
TOP2AP11388 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC31.7■■■□□ 2.67
TOP2AP11388 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
TOP2AP11388 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
TOP2AP11388 AC093010.1-201ENST00000473625 1624 ntBASIC31.7■■■□□ 2.66
TOP2AP11388 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
TOP2AP11388 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.66
TOP2AP11388 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.66
TOP2AP11388 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
TOP2AP11388 BEX3-201ENST00000361298 921 ntTSL 2 BASIC31.7■■■□□ 2.66
TOP2AP11388 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
TOP2AP11388 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC31.7■■■□□ 2.66
TOP2AP11388 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC31.7■■■□□ 2.66
TOP2AP11388 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC31.7■■■□□ 2.66
TOP2AP11388 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC31.7■■■□□ 2.66
TOP2AP11388 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
TOP2AP11388 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC31.69■■■□□ 2.66
TOP2AP11388 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC31.69■■■□□ 2.66
TOP2AP11388 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
TOP2AP11388 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
TOP2AP11388 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC31.69■■■□□ 2.66
TOP2AP11388 AL355385.1-201ENST00000606123 409 ntBASIC31.69■■■□□ 2.66
TOP2AP11388 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
TOP2AP11388 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
TOP2AP11388 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TOP2AP11388 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC31.68■■■□□ 2.66
TOP2AP11388 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC31.68■■■□□ 2.66
TOP2AP11388 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TOP2AP11388 CD9-202ENST00000382515 1229 ntTSL 5 BASIC31.68■■■□□ 2.66
TOP2AP11388 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
TOP2AP11388 PTGES2-AS1-201ENST00000443493 2100 ntBASIC31.68■■■□□ 2.66
TOP2AP11388 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC31.68■■■□□ 2.66
TOP2AP11388 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
TOP2AP11388 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC31.68■■■□□ 2.66
TOP2AP11388 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC31.68■■■□□ 2.66
TOP2AP11388 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC31.68■■■□□ 2.66
TOP2AP11388 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC31.68■■■□□ 2.66
TOP2AP11388 AC134684.3-201ENST00000641758 218 ntBASIC31.68■■■□□ 2.66
TOP2AP11388 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
TOP2AP11388 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms