Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.25□□□□□ -0.13
CD28P10747 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.25□□□□□ -0.13
CD28P10747 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
CD28P10747 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.25□□□□□ -0.13
CD28P10747 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD28P10747 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.24□□□□□ -0.13
CD28P10747 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CD28P10747 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.24□□□□□ -0.13
CD28P10747 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CD28P10747 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.24□□□□□ -0.13
CD28P10747 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.24□□□□□ -0.13
CD28P10747 AC079781.3-201ENST00000449110 356 ntBASIC14.24□□□□□ -0.13
CD28P10747 AC009078.2-202ENST00000463353 338 ntBASIC14.24□□□□□ -0.13
CD28P10747 KRT18P41-201ENST00000518924 1277 ntBASIC14.24□□□□□ -0.13
CD28P10747 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.24□□□□□ -0.13
CD28P10747 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.24□□□□□ -0.13
CD28P10747 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.24□□□□□ -0.13
CD28P10747 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.24□□□□□ -0.13
CD28P10747 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.24□□□□□ -0.13
CD28P10747 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.24□□□□□ -0.13
CD28P10747 AC083906.6-201ENST00000641366 219 ntBASIC14.24□□□□□ -0.13
CD28P10747 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.24□□□□□ -0.13
CD28P10747 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.24□□□□□ -0.13
CD28P10747 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 KRT89P-201ENST00000620027 1478 ntBASIC14.24□□□□□ -0.13
CD28P10747 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CD28P10747 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
CD28P10747 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD28P10747 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD28P10747 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CD28P10747 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.23□□□□□ -0.13
CD28P10747 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CD28P10747 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD28P10747 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD28P10747 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD28P10747 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.23□□□□□ -0.13
CD28P10747 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CD28P10747 IGHV3-47-201ENST00000425060 335 ntBASIC14.23□□□□□ -0.13
CD28P10747 AC091607.1-201ENST00000490318 1060 ntBASIC14.23□□□□□ -0.13
CD28P10747 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD28P10747 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD28P10747 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.23□□□□□ -0.13
CD28P10747 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.23□□□□□ -0.13
CD28P10747 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.23□□□□□ -0.13
CD28P10747 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.23□□□□□ -0.13
CD28P10747 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.23□□□□□ -0.13
CD28P10747 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.23□□□□□ -0.13
CD28P10747 AC011840.4-201ENST00000578471 627 ntBASIC14.23□□□□□ -0.13
CD28P10747 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
CD28P10747 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CD28P10747 NSUN5P1-202ENST00000421140 1535 ntBASIC14.23□□□□□ -0.13
CD28P10747 NSUN5P2-203ENST00000457352 1529 ntBASIC14.23□□□□□ -0.13
CD28P10747 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD28P10747 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD28P10747 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD28P10747 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD28P10747 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD28P10747 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD28P10747 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD28P10747 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.22□□□□□ -0.13
CD28P10747 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CD28P10747 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.22□□□□□ -0.13
CD28P10747 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CD28P10747 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CD28P10747 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms