Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RARAP10276 FLJ13224-201ENST00000313737 1514 ntBASIC19.14■□□□□ 0.65
RARAP10276 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.14■□□□□ 0.65
RARAP10276 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RARAP10276 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RARAP10276 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.14■□□□□ 0.65
RARAP10276 PHGDH-209ENST00000641074 1780 ntBASIC19.14■□□□□ 0.65
RARAP10276 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RARAP10276 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.13■□□□□ 0.65
RARAP10276 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RARAP10276 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RARAP10276 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.13■□□□□ 0.65
RARAP10276 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RARAP10276 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RARAP10276 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RARAP10276 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RARAP10276 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.13■□□□□ 0.65
RARAP10276 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.13■□□□□ 0.65
RARAP10276 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.13■□□□□ 0.65
RARAP10276 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.13■□□□□ 0.65
RARAP10276 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RARAP10276 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
RARAP10276 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
RARAP10276 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RARAP10276 GMCL1P1-201ENST00000463439 1581 ntBASIC19.13■□□□□ 0.65
RARAP10276 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RARAP10276 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RARAP10276 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.13■□□□□ 0.65
RARAP10276 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.13■□□□□ 0.65
RARAP10276 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.13■□□□□ 0.65
RARAP10276 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RARAP10276 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
RARAP10276 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RARAP10276 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RARAP10276 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RARAP10276 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RARAP10276 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RARAP10276 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.12■□□□□ 0.65
RARAP10276 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.12■□□□□ 0.65
RARAP10276 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RARAP10276 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RARAP10276 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RARAP10276 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.12■□□□□ 0.65
RARAP10276 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RARAP10276 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.12■□□□□ 0.65
RARAP10276 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.12■□□□□ 0.65
RARAP10276 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RARAP10276 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.12■□□□□ 0.65
RARAP10276 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.12■□□□□ 0.65
RARAP10276 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.12■□□□□ 0.65
RARAP10276 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.12■□□□□ 0.65
RARAP10276 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.12■□□□□ 0.65
RARAP10276 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.12■□□□□ 0.65
RARAP10276 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RARAP10276 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RARAP10276 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RARAP10276 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RARAP10276 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RARAP10276 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RARAP10276 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
RARAP10276 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RARAP10276 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RARAP10276 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RARAP10276 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.11■□□□□ 0.65
RARAP10276 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RARAP10276 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RARAP10276 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RARAP10276 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.11■□□□□ 0.65
RARAP10276 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RARAP10276 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RARAP10276 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.11■□□□□ 0.65
RARAP10276 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RARAP10276 KRT18P22-201ENST00000402024 1347 ntBASIC19.11■□□□□ 0.65
RARAP10276 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RARAP10276 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
RARAP10276 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.11■□□□□ 0.65
RARAP10276 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RARAP10276 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.11■□□□□ 0.65
RARAP10276 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.11■□□□□ 0.65
RARAP10276 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RARAP10276 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.11■□□□□ 0.65
RARAP10276 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RARAP10276 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.11■□□□□ 0.65
RARAP10276 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.11■□□□□ 0.65
RARAP10276 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.11■□□□□ 0.65
RARAP10276 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RARAP10276 AC145285.6-201ENST00000604632 637 ntBASIC19.11■□□□□ 0.65
RARAP10276 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.11■□□□□ 0.65
RARAP10276 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.11■□□□□ 0.65
RARAP10276 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RARAP10276 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RARAP10276 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RARAP10276 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RARAP10276 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RARAP10276 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RARAP10276 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RARAP10276 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RARAP10276 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RARAP10276 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RARAP10276 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms