Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 AC099336.1-202ENST00000602961 463 ntBASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB40ALP0C0E4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 KRT8P10-201ENST00000450021 1447 ntBASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 EMBP1-201ENST00000458200 901 ntBASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 AC138894.3-201ENST00000603787 634 ntBASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 AC004263.2-201ENST00000617183 678 ntBASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RAB40ALP0C0E4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 KRT16P4-201ENST00000453883 522 ntBASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 AL353801.3-201ENST00000609898 542 ntBASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB40ALP0C0E4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
RAB40ALP0C0E4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 POM121L3P-201ENST00000419331 1163 ntBASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 AL160237.2-201ENST00000556165 472 ntBASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB40ALP0C0E4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms