Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AP005117.1-201ENST00000584346 1413 ntBASIC18.83■□□□□ 0.61
RHOP08100 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RHOP08100 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RHOP08100 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RHOP08100 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RHOP08100 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RHOP08100 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RHOP08100 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RHOP08100 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.83■□□□□ 0.61
RHOP08100 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RHOP08100 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.83■□□□□ 0.6
RHOP08100 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RHOP08100 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.83■□□□□ 0.6
RHOP08100 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.83■□□□□ 0.6
RHOP08100 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.83■□□□□ 0.6
RHOP08100 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.83■□□□□ 0.6
RHOP08100 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.83■□□□□ 0.6
RHOP08100 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.83■□□□□ 0.6
RHOP08100 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RHOP08100 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.83■□□□□ 0.6
RHOP08100 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RHOP08100 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RHOP08100 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RHOP08100 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.83■□□□□ 0.6
RHOP08100 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RHOP08100 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RHOP08100 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RHOP08100 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHOP08100 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHOP08100 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHOP08100 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHOP08100 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
RHOP08100 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.82■□□□□ 0.6
RHOP08100 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHOP08100 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.82■□□□□ 0.6
RHOP08100 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHOP08100 ABCD1P5-201ENST00000445663 754 ntBASIC18.82■□□□□ 0.6
RHOP08100 RPL13AP23-201ENST00000480739 586 ntBASIC18.82■□□□□ 0.6
RHOP08100 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.82■□□□□ 0.6
RHOP08100 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RHOP08100 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.82■□□□□ 0.6
RHOP08100 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RHOP08100 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHOP08100 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.82■□□□□ 0.6
RHOP08100 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHOP08100 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHOP08100 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
RHOP08100 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHOP08100 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHOP08100 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHOP08100 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.81■□□□□ 0.6
RHOP08100 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RHOP08100 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHOP08100 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHOP08100 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
RHOP08100 RPS2P28-201ENST00000314255 741 ntBASIC18.81■□□□□ 0.6
RHOP08100 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.81■□□□□ 0.6
RHOP08100 AC112698.1-201ENST00000510299 916 ntBASIC18.81■□□□□ 0.6
RHOP08100 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.81■□□□□ 0.6
RHOP08100 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.81■□□□□ 0.6
RHOP08100 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHOP08100 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.81■□□□□ 0.6
RHOP08100 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.81■□□□□ 0.6
RHOP08100 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RHOP08100 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.81■□□□□ 0.6
RHOP08100 AC116407.3-201ENST00000623905 1129 ntBASIC18.81■□□□□ 0.6
RHOP08100 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.81■□□□□ 0.6
RHOP08100 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.81■□□□□ 0.6
RHOP08100 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.81■□□□□ 0.6
RHOP08100 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHOP08100 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RHOP08100 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHOP08100 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RHOP08100 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHOP08100 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHOP08100 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RHOP08100 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.8■□□□□ 0.6
RHOP08100 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.8■□□□□ 0.6
RHOP08100 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.8■□□□□ 0.6
RHOP08100 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.8■□□□□ 0.6
RHOP08100 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.8■□□□□ 0.6
RHOP08100 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHOP08100 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
RHOP08100 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.8■□□□□ 0.6
RHOP08100 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHOP08100 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RHOP08100 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RHOP08100 KRT18P13-201ENST00000400056 1290 ntBASIC18.8■□□□□ 0.6
RHOP08100 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RHOP08100 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.8■□□□□ 0.6
RHOP08100 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHOP08100 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHOP08100 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.8■□□□□ 0.6
RHOP08100 POLD2P1-201ENST00000511220 997 ntBASIC18.8■□□□□ 0.6
RHOP08100 SART3-203ENST00000546611 1184 ntBASIC18.8■□□□□ 0.6
RHOP08100 AC021087.4-201ENST00000563761 564 ntBASIC18.8■□□□□ 0.6
RHOP08100 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.8■□□□□ 0.6
RHOP08100 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHOP08100 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.8■□□□□ 0.6
RHOP08100 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms