Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.22■□□□□ 0.67
RB1P06400 AC027796.2-201ENST00000575326 344 ntBASIC19.22■□□□□ 0.67
RB1P06400 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.22■□□□□ 0.67
RB1P06400 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RB1P06400 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RB1P06400 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RB1P06400 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.22■□□□□ 0.67
RB1P06400 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RB1P06400 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.22■□□□□ 0.67
RB1P06400 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.22■□□□□ 0.67
RB1P06400 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RB1P06400 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RB1P06400 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RB1P06400 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RB1P06400 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RB1P06400 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RB1P06400 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RB1P06400 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.21■□□□□ 0.67
RB1P06400 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RB1P06400 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.21■□□□□ 0.67
RB1P06400 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.21■□□□□ 0.67
RB1P06400 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.21■□□□□ 0.67
RB1P06400 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.21■□□□□ 0.67
RB1P06400 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.21■□□□□ 0.67
RB1P06400 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.21■□□□□ 0.67
RB1P06400 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RB1P06400 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
RB1P06400 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.21■□□□□ 0.67
RB1P06400 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.21■□□□□ 0.67
RB1P06400 MTDHP5-201ENST00000598980 586 ntBASIC19.21■□□□□ 0.67
RB1P06400 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.21■□□□□ 0.67
RB1P06400 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.21■□□□□ 0.67
RB1P06400 AC134684.3-201ENST00000641758 218 ntBASIC19.21■□□□□ 0.67
RB1P06400 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
RB1P06400 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RB1P06400 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.21■□□□□ 0.67
RB1P06400 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RB1P06400 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RB1P06400 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RB1P06400 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RB1P06400 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.66
RB1P06400 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.2■□□□□ 0.66
RB1P06400 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.2■□□□□ 0.66
RB1P06400 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
RB1P06400 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RB1P06400 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.2■□□□□ 0.66
RB1P06400 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RB1P06400 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RB1P06400 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RB1P06400 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.2■□□□□ 0.66
RB1P06400 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RB1P06400 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RB1P06400 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.2■□□□□ 0.66
RB1P06400 AC112698.1-201ENST00000510299 916 ntBASIC19.2■□□□□ 0.66
RB1P06400 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RB1P06400 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.2■□□□□ 0.66
RB1P06400 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.2■□□□□ 0.66
RB1P06400 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.2■□□□□ 0.66
RB1P06400 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RB1P06400 PGM5P2-202ENST00000637225 1043 ntBASIC19.2■□□□□ 0.66
RB1P06400 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RB1P06400 AP002414.3-201ENST00000589352 1468 ntBASIC19.2■□□□□ 0.66
RB1P06400 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RB1P06400 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.2■□□□□ 0.66
RB1P06400 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.2■□□□□ 0.66
RB1P06400 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RB1P06400 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RB1P06400 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RB1P06400 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RB1P06400 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RB1P06400 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RB1P06400 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RB1P06400 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
RB1P06400 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RB1P06400 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.19■□□□□ 0.66
RB1P06400 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RB1P06400 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RB1P06400 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.19■□□□□ 0.66
RB1P06400 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RB1P06400 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.19■□□□□ 0.66
RB1P06400 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.19■□□□□ 0.66
RB1P06400 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.19■□□□□ 0.66
RB1P06400 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.19■□□□□ 0.66
RB1P06400 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RB1P06400 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.19■□□□□ 0.66
RB1P06400 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RB1P06400 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RB1P06400 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.19■□□□□ 0.66
RB1P06400 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
RB1P06400 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RB1P06400 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RB1P06400 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RB1P06400 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RB1P06400 AC097374.2-201ENST00000618617 1306 ntBASIC19.19■□□□□ 0.66
RB1P06400 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.19■□□□□ 0.66
RB1P06400 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RB1P06400 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RB1P06400 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RB1P06400 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.18■□□□□ 0.66
RB1P06400 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms