Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LMNAP02545 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.03■□□□□ 0.64
LMNAP02545 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LMNAP02545 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LMNAP02545 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LMNAP02545 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
LMNAP02545 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.02■□□□□ 0.64
LMNAP02545 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
LMNAP02545 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.02■□□□□ 0.64
LMNAP02545 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LMNAP02545 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.02■□□□□ 0.64
LMNAP02545 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LMNAP02545 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LMNAP02545 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LMNAP02545 DRAXINP1-201ENST00000437611 948 ntBASIC19.02■□□□□ 0.64
LMNAP02545 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.02■□□□□ 0.64
LMNAP02545 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.02■□□□□ 0.64
LMNAP02545 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.02■□□□□ 0.64
LMNAP02545 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LMNAP02545 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LMNAP02545 PHGDH-210ENST00000641115 1638 ntBASIC19.02■□□□□ 0.64
LMNAP02545 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.02■□□□□ 0.64
LMNAP02545 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
LMNAP02545 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.02■□□□□ 0.63
LMNAP02545 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
LMNAP02545 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LMNAP02545 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LMNAP02545 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LMNAP02545 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LMNAP02545 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
LMNAP02545 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.02■□□□□ 0.63
LMNAP02545 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LMNAP02545 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LMNAP02545 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.01■□□□□ 0.63
LMNAP02545 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNAP02545 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.01■□□□□ 0.63
LMNAP02545 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNAP02545 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNAP02545 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNAP02545 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNAP02545 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LMNAP02545 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.01■□□□□ 0.63
LMNAP02545 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LMNAP02545 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.01■□□□□ 0.63
LMNAP02545 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.01■□□□□ 0.63
LMNAP02545 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.01■□□□□ 0.63
LMNAP02545 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.01■□□□□ 0.63
LMNAP02545 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.01■□□□□ 0.63
LMNAP02545 LINC02084-201ENST00000606069 1096 ntBASIC19.01■□□□□ 0.63
LMNAP02545 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.01■□□□□ 0.63
LMNAP02545 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.01■□□□□ 0.63
LMNAP02545 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.01■□□□□ 0.63
LMNAP02545 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.01■□□□□ 0.63
LMNAP02545 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LMNAP02545 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LMNAP02545 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNAP02545 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNAP02545 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LMNAP02545 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNAP02545 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.01■□□□□ 0.63
LMNAP02545 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LMNAP02545 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNAP02545 AL354751.1-201ENST00000412768 1863 ntBASIC19.01■□□□□ 0.63
LMNAP02545 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNAP02545 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMNAP02545 BICD1-207ENST00000551848 1962 ntBASIC19.01■□□□□ 0.63
LMNAP02545 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19■□□□□ 0.63
LMNAP02545 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LMNAP02545 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LMNAP02545 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LMNAP02545 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LMNAP02545 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19■□□□□ 0.63
LMNAP02545 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19■□□□□ 0.63
LMNAP02545 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
LMNAP02545 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19■□□□□ 0.63
LMNAP02545 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19■□□□□ 0.63
LMNAP02545 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19■□□□□ 0.63
LMNAP02545 TPSP2-201ENST00000561760 610 ntBASIC19■□□□□ 0.63
LMNAP02545 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19■□□□□ 0.63
LMNAP02545 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19■□□□□ 0.63
LMNAP02545 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19■□□□□ 0.63
LMNAP02545 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LMNAP02545 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19■□□□□ 0.63
LMNAP02545 AC093525.10-201ENST00000625130 1569 ntBASIC19■□□□□ 0.63
LMNAP02545 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
LMNAP02545 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LMNAP02545 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LMNAP02545 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
LMNAP02545 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19■□□□□ 0.63
LMNAP02545 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
LMNAP02545 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LMNAP02545 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LMNAP02545 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19■□□□□ 0.63
LMNAP02545 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LMNAP02545 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19■□□□□ 0.63
LMNAP02545 GOLGA2P11-201ENST00000562660 1621 ntBASIC19■□□□□ 0.63
LMNAP02545 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LMNAP02545 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LMNAP02545 AC068880.1-201ENST00000507289 2297 ntBASIC18.99■□□□□ 0.63
LMNAP02545 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms