Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV12-3P01733 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRBV12-3P01733 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV12-3P01733 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV12-3P01733 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV12-3P01733 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV12-3P01733 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV12-3P01733 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV12-3P01733 BICD1-207ENST00000551848 1962 ntBASIC14.09□□□□□ -0.15
TRBV12-3P01733 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV12-3P01733 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
TRBV12-3P01733 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
TRBV12-3P01733 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRBV12-3P01733 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRBV12-3P01733 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.08□□□□□ -0.15
TRBV12-3P01733 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV12-3P01733 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV12-3P01733 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.08□□□□□ -0.16
TRBV12-3P01733 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TRBV12-3P01733 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV12-3P01733 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV12-3P01733 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV12-3P01733 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV12-3P01733 ARMC10P1-201ENST00000313754 855 ntBASIC14.08□□□□□ -0.16
TRBV12-3P01733 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV12-3P01733 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.08□□□□□ -0.16
TRBV12-3P01733 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV12-3P01733 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.08□□□□□ -0.16
TRBV12-3P01733 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.08□□□□□ -0.16
TRBV12-3P01733 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.08□□□□□ -0.16
TRBV12-3P01733 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.08□□□□□ -0.16
TRBV12-3P01733 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.08□□□□□ -0.16
TRBV12-3P01733 ZNF444P1-201ENST00000559497 298 ntBASIC14.08□□□□□ -0.16
TRBV12-3P01733 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.08□□□□□ -0.16
TRBV12-3P01733 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRBV12-3P01733 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.08□□□□□ -0.16
TRBV12-3P01733 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV12-3P01733 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRBV12-3P01733 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV12-3P01733 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV12-3P01733 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRBV12-3P01733 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV12-3P01733 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV12-3P01733 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV12-3P01733 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRBV12-3P01733 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
TRBV12-3P01733 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TRBV12-3P01733 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRBV12-3P01733 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 AC135050.7-201ENST00000624508 2218 ntBASIC14.07□□□□□ -0.16
TRBV12-3P01733 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRBV12-3P01733 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.07□□□□□ -0.16
TRBV12-3P01733 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.07□□□□□ -0.16
TRBV12-3P01733 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.07□□□□□ -0.16
TRBV12-3P01733 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.07□□□□□ -0.16
TRBV12-3P01733 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
TRBV12-3P01733 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.07□□□□□ -0.16
TRBV12-3P01733 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.07□□□□□ -0.16
TRBV12-3P01733 AC024563.2-201ENST00000603282 481 ntBASIC14.07□□□□□ -0.16
TRBV12-3P01733 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.07□□□□□ -0.16
TRBV12-3P01733 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRBV12-3P01733 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV12-3P01733 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV12-3P01733 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV12-3P01733 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV12-3P01733 REXO1L9P-201ENST00000604264 2108 ntBASIC14.06□□□□□ -0.16
TRBV12-3P01733 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV12-3P01733 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRBV12-3P01733 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRBV12-3P01733 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRBV12-3P01733 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV12-3P01733 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV12-3P01733 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV12-3P01733 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.06□□□□□ -0.16
TRBV12-3P01733 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV12-3P01733 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV12-3P01733 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TRBV12-3P01733 AL096828.2-201ENST00000567259 1965 ntBASIC14.06□□□□□ -0.16
TRBV12-3P01733 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV12-3P01733 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms