Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PDGFBP01127 MTMR9LP-203ENST00000426597 1545 ntBASIC18.24■□□□□ 0.51
PDGFBP01127 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFBP01127 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFBP01127 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFBP01127 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.24■□□□□ 0.51
PDGFBP01127 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PDGFBP01127 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.24■□□□□ 0.51
PDGFBP01127 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.24■□□□□ 0.51
PDGFBP01127 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.24■□□□□ 0.51
PDGFBP01127 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.24■□□□□ 0.51
PDGFBP01127 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PDGFBP01127 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFBP01127 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.24■□□□□ 0.51
PDGFBP01127 AC009102.3-201ENST00000623118 1491 ntBASIC18.24■□□□□ 0.51
PDGFBP01127 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDGFBP01127 HEIH-201ENST00000623091 1652 ntBASIC18.24■□□□□ 0.51
PDGFBP01127 FP475955.4-201ENST00000623131 1990 ntBASIC18.24■□□□□ 0.51
PDGFBP01127 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PDGFBP01127 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PDGFBP01127 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.24■□□□□ 0.51
PDGFBP01127 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFBP01127 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PDGFBP01127 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.23■□□□□ 0.51
PDGFBP01127 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFBP01127 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
PDGFBP01127 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFBP01127 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
PDGFBP01127 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFBP01127 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFBP01127 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PDGFBP01127 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFBP01127 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFBP01127 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.23■□□□□ 0.51
PDGFBP01127 KRT18P41-201ENST00000518924 1277 ntBASIC18.23■□□□□ 0.51
PDGFBP01127 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.23■□□□□ 0.51
PDGFBP01127 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.23■□□□□ 0.51
PDGFBP01127 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.23■□□□□ 0.51
PDGFBP01127 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.23■□□□□ 0.51
PDGFBP01127 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.23■□□□□ 0.51
PDGFBP01127 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.23■□□□□ 0.51
PDGFBP01127 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.23■□□□□ 0.51
PDGFBP01127 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.23■□□□□ 0.51
PDGFBP01127 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFBP01127 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFBP01127 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.23■□□□□ 0.51
PDGFBP01127 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
PDGFBP01127 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFBP01127 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFBP01127 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.23■□□□□ 0.51
PDGFBP01127 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PDGFBP01127 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDGFBP01127 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDGFBP01127 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDGFBP01127 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDGFBP01127 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.22■□□□□ 0.51
PDGFBP01127 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.22■□□□□ 0.51
PDGFBP01127 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDGFBP01127 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.22■□□□□ 0.51
PDGFBP01127 MIR4751-201ENST00000578027 74 ntBASIC18.22■□□□□ 0.51
PDGFBP01127 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDGFBP01127 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDGFBP01127 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
PDGFBP01127 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDGFBP01127 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
PDGFBP01127 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.22■□□□□ 0.51
PDGFBP01127 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDGFBP01127 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDGFBP01127 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDGFBP01127 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.21■□□□□ 0.51
PDGFBP01127 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDGFBP01127 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDGFBP01127 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.21■□□□□ 0.51
PDGFBP01127 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PDGFBP01127 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDGFBP01127 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDGFBP01127 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDGFBP01127 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.21■□□□□ 0.51
PDGFBP01127 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.21■□□□□ 0.51
PDGFBP01127 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.21■□□□□ 0.51
PDGFBP01127 MIR4745-201ENST00000577608 62 ntBASIC18.21■□□□□ 0.51
PDGFBP01127 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDGFBP01127 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.21■□□□□ 0.51
PDGFBP01127 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.21■□□□□ 0.51
PDGFBP01127 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.21■□□□□ 0.51
PDGFBP01127 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDGFBP01127 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDGFBP01127 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDGFBP01127 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDGFBP01127 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.21■□□□□ 0.51
PDGFBP01127 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PDGFBP01127 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDGFBP01127 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.21■□□□□ 0.51
PDGFBP01127 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFBP01127 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFBP01127 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PDGFBP01127 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFBP01127 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDGFBP01127 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.2■□□□□ 0.5
PDGFBP01127 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms