Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CNOT4O95628 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.2■□□□□ 0.18
CNOT4O95628 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CNOT4O95628 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CNOT4O95628 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.2■□□□□ 0.18
CNOT4O95628 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.2■□□□□ 0.18
CNOT4O95628 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
CNOT4O95628 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.2■□□□□ 0.18
CNOT4O95628 AL031598.1-201ENST00000561511 1773 ntBASIC16.2■□□□□ 0.18
CNOT4O95628 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.2■□□□□ 0.18
CNOT4O95628 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.2■□□□□ 0.18
CNOT4O95628 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT4O95628 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.19■□□□□ 0.18
CNOT4O95628 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.19■□□□□ 0.18
CNOT4O95628 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.19■□□□□ 0.18
CNOT4O95628 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.19■□□□□ 0.18
CNOT4O95628 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.19■□□□□ 0.18
CNOT4O95628 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CNOT4O95628 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.19■□□□□ 0.18
CNOT4O95628 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CNOT4O95628 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CNOT4O95628 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.19■□□□□ 0.18
CNOT4O95628 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.19■□□□□ 0.18
CNOT4O95628 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 SPDYE13P-201ENST00000445314 798 ntBASIC16.19■□□□□ 0.18
CNOT4O95628 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.19■□□□□ 0.18
CNOT4O95628 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.19■□□□□ 0.18
CNOT4O95628 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.19■□□□□ 0.18
CNOT4O95628 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.19■□□□□ 0.18
CNOT4O95628 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CNOT4O95628 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.19■□□□□ 0.18
CNOT4O95628 AL691432.3-201ENST00000621860 400 ntBASIC16.19■□□□□ 0.18
CNOT4O95628 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.19■□□□□ 0.18
CNOT4O95628 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 ANO7L1-203ENST00000602586 1720 ntBASIC16.19■□□□□ 0.18
CNOT4O95628 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.19■□□□□ 0.18
CNOT4O95628 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CNOT4O95628 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.19■□□□□ 0.18
CNOT4O95628 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT4O95628 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CNOT4O95628 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.18■□□□□ 0.18
CNOT4O95628 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNOT4O95628 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.18■□□□□ 0.18
CNOT4O95628 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNOT4O95628 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNOT4O95628 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.18■□□□□ 0.18
CNOT4O95628 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNOT4O95628 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNOT4O95628 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.18■□□□□ 0.18
CNOT4O95628 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.18■□□□□ 0.18
CNOT4O95628 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.18■□□□□ 0.18
CNOT4O95628 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.18■□□□□ 0.18
CNOT4O95628 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.18■□□□□ 0.18
CNOT4O95628 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CNOT4O95628 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CNOT4O95628 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.18■□□□□ 0.18
CNOT4O95628 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.18■□□□□ 0.18
CNOT4O95628 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.18■□□□□ 0.18
CNOT4O95628 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CNOT4O95628 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNOT4O95628 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CNOT4O95628 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNOT4O95628 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNOT4O95628 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNOT4O95628 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNOT4O95628 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms