Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
VAPBO95292 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VAPBO95292 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.34■□□□□ 0.53
VAPBO95292 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VAPBO95292 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VAPBO95292 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VAPBO95292 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.33■□□□□ 0.53
VAPBO95292 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VAPBO95292 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
VAPBO95292 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.33■□□□□ 0.53
VAPBO95292 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.33■□□□□ 0.53
VAPBO95292 AC020916.1-201ENST00000587762 1774 ntBASIC18.33■□□□□ 0.53
VAPBO95292 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.33■□□□□ 0.53
VAPBO95292 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VAPBO95292 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VAPBO95292 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VAPBO95292 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VAPBO95292 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.33■□□□□ 0.52
VAPBO95292 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.33■□□□□ 0.52
VAPBO95292 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VAPBO95292 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.33■□□□□ 0.52
VAPBO95292 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.33■□□□□ 0.52
VAPBO95292 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.33■□□□□ 0.52
VAPBO95292 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.33■□□□□ 0.52
VAPBO95292 MIR3180-4-201ENST00000582223 153 ntBASIC18.33■□□□□ 0.52
VAPBO95292 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.33■□□□□ 0.52
VAPBO95292 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.33■□□□□ 0.52
VAPBO95292 AC010240.3-201ENST00000607688 395 ntBASIC18.33■□□□□ 0.52
VAPBO95292 AC024243.1-201ENST00000609234 778 ntBASIC18.33■□□□□ 0.52
VAPBO95292 LINC01126-201ENST00000623515 1646 ntBASIC18.33■□□□□ 0.52
VAPBO95292 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.33■□□□□ 0.52
VAPBO95292 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.33■□□□□ 0.52
VAPBO95292 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VAPBO95292 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VAPBO95292 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.33■□□□□ 0.52
VAPBO95292 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VAPBO95292 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
VAPBO95292 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VAPBO95292 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAPBO95292 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAPBO95292 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.32■□□□□ 0.52
VAPBO95292 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.32■□□□□ 0.52
VAPBO95292 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAPBO95292 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
VAPBO95292 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VAPBO95292 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VAPBO95292 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.32■□□□□ 0.52
VAPBO95292 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAPBO95292 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.32■□□□□ 0.52
VAPBO95292 AL512604.3-201ENST00000569583 964 ntBASIC18.32■□□□□ 0.52
VAPBO95292 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.32■□□□□ 0.52
VAPBO95292 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
VAPBO95292 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAPBO95292 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAPBO95292 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
VAPBO95292 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAPBO95292 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
VAPBO95292 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAPBO95292 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAPBO95292 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
VAPBO95292 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.31■□□□□ 0.52
VAPBO95292 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.31■□□□□ 0.52
VAPBO95292 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.31■□□□□ 0.52
VAPBO95292 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.31■□□□□ 0.52
VAPBO95292 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.31■□□□□ 0.52
VAPBO95292 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
VAPBO95292 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 SEC1P-202ENST00000473944 940 ntBASIC18.31■□□□□ 0.52
VAPBO95292 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.31■□□□□ 0.52
VAPBO95292 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.31■□□□□ 0.52
VAPBO95292 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.31■□□□□ 0.52
VAPBO95292 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.31■□□□□ 0.52
VAPBO95292 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.31■□□□□ 0.52
VAPBO95292 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.31■□□□□ 0.52
VAPBO95292 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.31■□□□□ 0.52
VAPBO95292 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.31■□□□□ 0.52
VAPBO95292 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.31■□□□□ 0.52
VAPBO95292 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.31■□□□□ 0.52
VAPBO95292 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
VAPBO95292 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
VAPBO95292 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAPBO95292 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.31■□□□□ 0.52
VAPBO95292 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms