Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN11O75508 KRT18P65-201ENST00000439811 1286 ntBASIC18.58■□□□□ 0.56
CLDN11O75508 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN11O75508 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.58■□□□□ 0.56
CLDN11O75508 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CLDN11O75508 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN11O75508 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN11O75508 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN11O75508 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN11O75508 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN11O75508 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN11O75508 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN11O75508 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN11O75508 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN11O75508 AC093677.2-201ENST00000600169 1863 ntBASIC18.58■□□□□ 0.56
CLDN11O75508 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN11O75508 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN11O75508 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN11O75508 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN11O75508 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN11O75508 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.57■□□□□ 0.56
CLDN11O75508 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN11O75508 AC093010.1-201ENST00000473625 1624 ntBASIC18.57■□□□□ 0.56
CLDN11O75508 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.57■□□□□ 0.56
CLDN11O75508 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN11O75508 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN11O75508 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN11O75508 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN11O75508 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN11O75508 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.57■□□□□ 0.56
CLDN11O75508 TPSP2-201ENST00000561760 610 ntBASIC18.57■□□□□ 0.56
CLDN11O75508 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
CLDN11O75508 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN11O75508 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.57■□□□□ 0.56
CLDN11O75508 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
CLDN11O75508 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN11O75508 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.57■□□□□ 0.56
CLDN11O75508 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN11O75508 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN11O75508 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN11O75508 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
CLDN11O75508 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN11O75508 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN11O75508 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN11O75508 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CLDN11O75508 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.56■□□□□ 0.56
CLDN11O75508 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN11O75508 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN11O75508 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN11O75508 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN11O75508 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN11O75508 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CLDN11O75508 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.56■□□□□ 0.56
CLDN11O75508 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN11O75508 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
CLDN11O75508 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
CLDN11O75508 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN11O75508 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN11O75508 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN11O75508 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN11O75508 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN11O75508 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN11O75508 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN11O75508 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN11O75508 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN11O75508 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN11O75508 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN11O75508 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN11O75508 AC135776.1-201ENST00000319817 2481 ntBASIC18.55■□□□□ 0.56
CLDN11O75508 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN11O75508 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN11O75508 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN11O75508 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN11O75508 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN11O75508 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN11O75508 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN11O75508 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CLDN11O75508 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.55■□□□□ 0.56
CLDN11O75508 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.55■□□□□ 0.56
CLDN11O75508 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms