Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 HEIH-201ENST00000623091 1652 ntBASIC17.01■□□□□ 0.31
TRIM3O75382 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM3O75382 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM3O75382 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.01■□□□□ 0.31
TRIM3O75382 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM3O75382 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM3O75382 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM3O75382 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM3O75382 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.01■□□□□ 0.31
TRIM3O75382 AC024243.1-201ENST00000609234 778 ntBASIC17.01■□□□□ 0.31
TRIM3O75382 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM3O75382 AC112497.1-201ENST00000624824 639 ntBASIC17.01■□□□□ 0.31
TRIM3O75382 AL031598.1-201ENST00000561511 1773 ntBASIC17.01■□□□□ 0.31
TRIM3O75382 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM3O75382 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM3O75382 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM3O75382 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRIM3O75382 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 BICD1-207ENST00000551848 1962 ntBASIC17■□□□□ 0.31
TRIM3O75382 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
TRIM3O75382 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
TRIM3O75382 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17■□□□□ 0.31
TRIM3O75382 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17■□□□□ 0.31
TRIM3O75382 COPE-203ENST00000351079 907 ntTSL 2 BASIC17■□□□□ 0.31
TRIM3O75382 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 STARP1-201ENST00000397973 869 ntBASIC17■□□□□ 0.31
TRIM3O75382 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 KRT18P38-201ENST00000449496 1282 ntBASIC17■□□□□ 0.31
TRIM3O75382 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17■□□□□ 0.31
TRIM3O75382 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17■□□□□ 0.31
TRIM3O75382 AL359075.1-203ENST00000462729 1002 ntBASIC17■□□□□ 0.31
TRIM3O75382 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17■□□□□ 0.31
TRIM3O75382 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRIM3O75382 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRIM3O75382 KRT8P7-201ENST00000533003 1432 ntBASIC17■□□□□ 0.31
TRIM3O75382 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 AC087388.1-201ENST00000571370 1112 ntBASIC17■□□□□ 0.31
TRIM3O75382 HOXB1-202ENST00000577092 1414 ntBASIC17■□□□□ 0.31
TRIM3O75382 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17■□□□□ 0.31
TRIM3O75382 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17■□□□□ 0.31
TRIM3O75382 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17■□□□□ 0.31
TRIM3O75382 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17■□□□□ 0.31
TRIM3O75382 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17■□□□□ 0.31
TRIM3O75382 AC083906.6-201ENST00000641366 219 ntBASIC17■□□□□ 0.31
TRIM3O75382 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17■□□□□ 0.31
TRIM3O75382 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17■□□□□ 0.31
TRIM3O75382 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17■□□□□ 0.31
TRIM3O75382 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17■□□□□ 0.31
TRIM3O75382 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TRIM3O75382 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM3O75382 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM3O75382 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM3O75382 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRIM3O75382 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM3O75382 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM3O75382 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM3O75382 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM3O75382 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRIM3O75382 SEC1P-202ENST00000473944 940 ntBASIC16.99■□□□□ 0.31
TRIM3O75382 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM3O75382 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.99■□□□□ 0.31
TRIM3O75382 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM3O75382 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.99■□□□□ 0.31
TRIM3O75382 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM3O75382 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM3O75382 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM3O75382 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM3O75382 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms