Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.07■□□□□ 0.32
CTNSO60931 AC005332.3-201ENST00000589904 676 ntBASIC17.07■□□□□ 0.32
CTNSO60931 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CTNSO60931 AC116407.4-201ENST00000623319 1061 ntBASIC17.07■□□□□ 0.32
CTNSO60931 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.07■□□□□ 0.32
CTNSO60931 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNSO60931 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNSO60931 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNSO60931 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CTNSO60931 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTNSO60931 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNSO60931 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNSO60931 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.07■□□□□ 0.32
CTNSO60931 AC026471.1-201ENST00000564629 3026 ntBASIC17.07■□□□□ 0.32
CTNSO60931 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNSO60931 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNSO60931 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNSO60931 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTNSO60931 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CTNSO60931 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNSO60931 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
CTNSO60931 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CTNSO60931 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.06■□□□□ 0.32
CTNSO60931 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNSO60931 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.06■□□□□ 0.32
CTNSO60931 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNSO60931 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.06■□□□□ 0.32
CTNSO60931 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.06■□□□□ 0.32
CTNSO60931 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTNSO60931 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
CTNSO60931 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.06■□□□□ 0.32
CTNSO60931 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.06■□□□□ 0.32
CTNSO60931 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.06■□□□□ 0.32
CTNSO60931 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.06■□□□□ 0.32
CTNSO60931 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNSO60931 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.06■□□□□ 0.32
CTNSO60931 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.06■□□□□ 0.32
CTNSO60931 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.06■□□□□ 0.32
CTNSO60931 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.06■□□□□ 0.32
CTNSO60931 RNF126P1-202ENST00000569893 925 ntBASIC17.06■□□□□ 0.32
CTNSO60931 AC011498.5-201ENST00000592027 486 ntBASIC17.06■□□□□ 0.32
CTNSO60931 GPR32P1-201ENST00000601788 811 ntBASIC17.06■□□□□ 0.32
CTNSO60931 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.06■□□□□ 0.32
CTNSO60931 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.06■□□□□ 0.32
CTNSO60931 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNSO60931 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNSO60931 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CTNSO60931 LETM1P2-201ENST00000597330 2178 ntBASIC17.06■□□□□ 0.32
CTNSO60931 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTNSO60931 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTNSO60931 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTNSO60931 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNSO60931 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNSO60931 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.05■□□□□ 0.32
CTNSO60931 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.05■□□□□ 0.32
CTNSO60931 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNSO60931 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
CTNSO60931 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CTNSO60931 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNSO60931 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNSO60931 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNSO60931 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNSO60931 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTNSO60931 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTNSO60931 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.05■□□□□ 0.32
CTNSO60931 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.05■□□□□ 0.32
CTNSO60931 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.05■□□□□ 0.32
CTNSO60931 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.05■□□□□ 0.32
CTNSO60931 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CTNSO60931 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.05■□□□□ 0.32
CTNSO60931 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.05■□□□□ 0.32
CTNSO60931 AC091076.1-201ENST00000610741 619 ntBASIC17.05■□□□□ 0.32
CTNSO60931 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.05■□□□□ 0.32
CTNSO60931 AL358472.4-201ENST00000633140 710 ntBASIC17.05■□□□□ 0.32
CTNSO60931 AP000550.4-202ENST00000639755 178 ntBASIC17.05■□□□□ 0.32
CTNSO60931 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CTNSO60931 BICD1-207ENST00000551848 1962 ntBASIC17.05■□□□□ 0.32
CTNSO60931 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CTNSO60931 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNSO60931 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.05■□□□□ 0.32
CTNSO60931 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNSO60931 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.05■□□□□ 0.32
CTNSO60931 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNSO60931 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNSO60931 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNSO60931 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CTNSO60931 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNSO60931 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.04■□□□□ 0.32
CTNSO60931 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNSO60931 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CTNSO60931 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNSO60931 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNSO60931 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.04■□□□□ 0.32
CTNSO60931 IER3-202ENST00000376377 1350 ntBASIC17.04■□□□□ 0.32
CTNSO60931 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNSO60931 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CTNSO60931 BCL2-203ENST00000589955 5011 ntBASIC17.04■□□□□ 0.32
CTNSO60931 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CTNSO60931 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CTNSO60931 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms